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A5FKI2

- A5FKI2_FLAJ1

UniProt

A5FKI2 - A5FKI2_FLAJ1

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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

kgd

Organism
Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: UniProtKB-EC
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciFJOH376686:GIXN-1281-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
Name:kgdImported
Ordered Locus Names:Fjoh_1256Imported
OrganismiFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)Imported
Taxonomic identifieri376686 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
ProteomesiUP000006694: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi376686.Fjoh_1256.

Structurei

3D structure databases

ProteinModelPortaliA5FKI2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiGHQNANL.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

A5FKI2-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDRFSFLNAA HTEFFAQLYD QYLVNPDSVE PSWRSFFQGF DFGQTTYNDE
60 70 80 90 100
NPVQTIVEYV TSPNTDYSQV SDKLQKEFNV LKLIDGYRTR GHLFTKTNPV
110 120 130 140 150
RDRRQSSPTL DIENFGLSTA DLSTVFDAAQ TIGMTPSSLE AIVNRLKAIY
160 170 180 190 200
CQHIGIEYMY IRNPGVVKWI QDKLAVNVNQ PNFSTEEKKT ILNKLNEAVS
210 220 230 240 250
FENFLHTKYV GQKRFSLEGG ESIIPALDAL IEQAAEKGVE QFVMGMAHRG
260 270 280 290 300
RLNVLANIFG KSTQDIFGEF DGKDYDQEYF DGDVKYHLGL TADKKTRSGK
310 320 330 340 350
SININLAPNP SHLETVGAVI EGITRAKQDK YYNDDFSKVL PIAVHGDAAI
360 370 380 390 400
AGQGILYEII QMAQLDGYKT GGTIHIVINN QVGFTTNYLD ARSSTYCTDV
410 420 430 440 450
AKVTLSPVLH VNADDAEAVV HAVSFALDYR MQFGRDVFID LLGYRKYGHN
460 470 480 490 500
EGDEPRFTQP VLYKIIAKHK NPRDIYAEKL LSDGVIDASY VNGLEKQYKS
510 520 530 540 550
QLEENLEASR KKDLTIITPF MKNEWEGFVQ VTDTQMLQKV DTTFAKEGLD
560 570 580 590 600
SIIKTISTLP EDKKFINKIT KIVTDRKVGY DNNTLDWGTA EALAYGSLLT
610 620 630 640 650
EGFDVRISGQ DVERGTFSHR HAVVKVEDSE EEVILLDAIE NKKGKFGVFN
660 670 680 690 700
SLLSEYGVLG FDYGYALANP KALTIWEAQF GDFSNGAQIM IDQYISCGED
710 720 730 740 750
KWNNQNGIVL LLPHGYEGQG AEHSSARMER YLQLCARHNM YVADCTTPAN
760 770 780 790 800
FFHLLRRQMK TNFRKPLVVF SPKSLLRDPR CVSTVEELAT GSFQETIDDT
810 820 830 840 850
TVNKKDVKTL VFCTGKFYYD IVAERENNGR KDVAVVRIEQ LFPFPVEQIK
860 870 880 890 900
EIIAKYPNAD DYVWAQEEPK NMGAYSFMLM NFDLVKWRLA SLKAYSAPAS
910 920
GSYTRAKRRH ADAIRMVFDK NLFR
Length:924
Mass (Da):104,609
Last modified:June 12, 2007 - v1
Checksum:iE631F5C992EAF049
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000685 Genomic DNA. Translation: ABQ04288.1.
RefSeqiYP_001193607.1. NC_009441.1.

Genome annotation databases

EnsemblBacteriaiABQ04288; ABQ04288; Fjoh_1256.
GeneIDi5090056.
KEGGifjo:Fjoh_1256.
PATRICi21896825. VBIFlaJoh53613_1293.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000685 Genomic DNA. Translation: ABQ04288.1 .
RefSeqi YP_001193607.1. NC_009441.1.

3D structure databases

ProteinModelPortali A5FKI2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 376686.Fjoh_1256.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ04288 ; ABQ04288 ; Fjoh_1256 .
GeneIDi 5090056.
KEGGi fjo:Fjoh_1256.
PATRICi 21896825. VBIFlaJoh53613_1293.

Phylogenomic databases

eggNOGi COG0567.
HOGENOMi HOG000259588.
KOi K00164.
OMAi GHQNANL.
OrthoDBi EOG6V1M1F.

Enzyme and pathway databases

BioCyci FJOH376686:GIXN-1281-MONOMER.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis."
    McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B., Rhodes R.G., Goltsman E., Wang W., Xu J., Hunnicutt D.W., Staroscik A.M., Hoover T.R., Cheng Y.Q., Stein J.L.
    Appl. Environ. Microbiol. 75:6864-6875(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17061 / DSM 2064 / UW101Imported.

Entry informationi

Entry nameiA5FKI2_FLAJ1
AccessioniPrimary (citable) accession number: A5FKI2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: October 1, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3