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Protein
Submitted name:

2-oxoglutarate dehydrogenase, E1 subunit

Gene

kgd

Organism
Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciFJOH376686:GIXN-1281-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoglutarate dehydrogenase, E1 subunitImported (EC:1.2.4.2Imported)
Gene namesi
Name:kgdImported
Ordered Locus Names:Fjoh_1256Imported
OrganismiFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)Imported
Taxonomic identifieri376686 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
ProteomesiUP000006694 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi376686.Fjoh_1256.

Structurei

3D structure databases

ProteinModelPortaliA5FKI2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

A5FKI2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDRFSFLNAA HTEFFAQLYD QYLVNPDSVE PSWRSFFQGF DFGQTTYNDE
60 70 80 90 100
NPVQTIVEYV TSPNTDYSQV SDKLQKEFNV LKLIDGYRTR GHLFTKTNPV
110 120 130 140 150
RDRRQSSPTL DIENFGLSTA DLSTVFDAAQ TIGMTPSSLE AIVNRLKAIY
160 170 180 190 200
CQHIGIEYMY IRNPGVVKWI QDKLAVNVNQ PNFSTEEKKT ILNKLNEAVS
210 220 230 240 250
FENFLHTKYV GQKRFSLEGG ESIIPALDAL IEQAAEKGVE QFVMGMAHRG
260 270 280 290 300
RLNVLANIFG KSTQDIFGEF DGKDYDQEYF DGDVKYHLGL TADKKTRSGK
310 320 330 340 350
SININLAPNP SHLETVGAVI EGITRAKQDK YYNDDFSKVL PIAVHGDAAI
360 370 380 390 400
AGQGILYEII QMAQLDGYKT GGTIHIVINN QVGFTTNYLD ARSSTYCTDV
410 420 430 440 450
AKVTLSPVLH VNADDAEAVV HAVSFALDYR MQFGRDVFID LLGYRKYGHN
460 470 480 490 500
EGDEPRFTQP VLYKIIAKHK NPRDIYAEKL LSDGVIDASY VNGLEKQYKS
510 520 530 540 550
QLEENLEASR KKDLTIITPF MKNEWEGFVQ VTDTQMLQKV DTTFAKEGLD
560 570 580 590 600
SIIKTISTLP EDKKFINKIT KIVTDRKVGY DNNTLDWGTA EALAYGSLLT
610 620 630 640 650
EGFDVRISGQ DVERGTFSHR HAVVKVEDSE EEVILLDAIE NKKGKFGVFN
660 670 680 690 700
SLLSEYGVLG FDYGYALANP KALTIWEAQF GDFSNGAQIM IDQYISCGED
710 720 730 740 750
KWNNQNGIVL LLPHGYEGQG AEHSSARMER YLQLCARHNM YVADCTTPAN
760 770 780 790 800
FFHLLRRQMK TNFRKPLVVF SPKSLLRDPR CVSTVEELAT GSFQETIDDT
810 820 830 840 850
TVNKKDVKTL VFCTGKFYYD IVAERENNGR KDVAVVRIEQ LFPFPVEQIK
860 870 880 890 900
EIIAKYPNAD DYVWAQEEPK NMGAYSFMLM NFDLVKWRLA SLKAYSAPAS
910 920
GSYTRAKRRH ADAIRMVFDK NLFR
Length:924
Mass (Da):104,609
Last modified:June 12, 2007 - v1
Checksum:iE631F5C992EAF049
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000685 Genomic DNA. Translation: ABQ04288.1.
RefSeqiWP_012023337.1. NC_009441.1.
YP_001193607.1. NC_009441.1.

Genome annotation databases

EnsemblBacteriaiABQ04288; ABQ04288; Fjoh_1256.
KEGGifjo:Fjoh_1256.
PATRICi21896825. VBIFlaJoh53613_1293.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000685 Genomic DNA. Translation: ABQ04288.1.
RefSeqiWP_012023337.1. NC_009441.1.
YP_001193607.1. NC_009441.1.

3D structure databases

ProteinModelPortaliA5FKI2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi376686.Fjoh_1256.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ04288; ABQ04288; Fjoh_1256.
KEGGifjo:Fjoh_1256.
PATRICi21896825. VBIFlaJoh53613_1293.

Phylogenomic databases

eggNOGiCOG0567.
HOGENOMiHOG000259588.
KOiK00164.
OMAiQNQGAWF.
OrthoDBiEOG6V1M1F.

Enzyme and pathway databases

BioCyciFJOH376686:GIXN-1281-MONOMER.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis."
    McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B., Rhodes R.G., Goltsman E., Wang W., Xu J., Hunnicutt D.W., Staroscik A.M., Hoover T.R., Cheng Y.Q., Stein J.L.
    Appl. Environ. Microbiol. 75:6864-6875(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 17061 / DSM 2064 / UW101Imported.

Entry informationi

Entry nameiA5FKI2_FLAJ1
AccessioniPrimary (citable) accession number: A5FKI2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 27, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.