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A5FK35

- A5FK35_FLAJ1

UniProt

A5FK35 - A5FK35_FLAJ1

Protein
Submitted name:

Candidate alpha glycosidase Glycoside hydrolase family 13

Gene

Fjoh_1398

Organism
Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciFJOH376686:GIXN-1427-MONOMER.

    Protein family/group databases

    CAZyiGH13. Glycoside Hydrolase Family 13.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Candidate alpha glycosidase Glycoside hydrolase family 13Imported
    Gene namesi
    Ordered Locus Names:Fjoh_1398Imported
    OrganismiFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae)Imported
    Taxonomic identifieri376686 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
    ProteomesiUP000006694: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2424 PotentialImportedAdd
    BLAST
    Chaini25 – 553529 PotentialImportedPRO_5000244073Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi376686.Fjoh_1398.

    Structurei

    3D structure databases

    ProteinModelPortaliA5FK35.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG0366.
    HOGENOMiHOG000273912.
    KOiK01176.
    OMAiGQNWHSF.
    OrthoDBiEOG65QWH3.

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A5FK35-1 [UniParc]FASTAAdd to Basket

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    MKKYTFLYLS LVFLIMGCSG SKSVTMNNTS KTPFVWEGAN VYFLLTDRFY    50
    NGDTSNDVNF NRTKTPGKLR GFEGGDIIGI TKKIESGYFE KLGINAIWLT 100
    PIVEQIHDGV DEGTGLSYGF HGYWAKDWTA LDPNFGTKED LANLVKKAHE 150
    KGIRIILDGV INHTGPVTPE DPVWPSDWVR TGVVCDYKSF ENTTMCTLVD 200
    NLPDIRTESV QEVELPLLLI EKWKKEDRYE KEIASLDEFF KRTGYPRTPK 250
    YYIIKWLTDY ILEFGIDGYR ADTVKHTEEA LWADFKKECD YAFETWKKHH 300
    PLQVLDQNPF YTIAEVYGYG ISGGQDYDFG DRKVNYFQNG FNSMINFEFK 350
    WNAAQNDYEG LFSKYSNALN NDLKGYSVLN YMSSHDDGQP FDANRTKSIE 400
    TANKLLLSPG MSQVYYGDES ARSLVIEGTQ GDATLRSNMN WEDIQNNPET 450
    QKTLLHWQKL GQFRRNHPAV GAGVHKLINP YPYTFSRTFT KGSFIDKVVM 500
    GVDLPKGRKE LPVGDVFPNG TKLKDTYSNQ EVEVIDGKVI IDNDFDIVLL 550
    EEI 553
    Length:553
    Mass (Da):63,222
    Last modified:June 12, 2007 - v1
    Checksum:i9AF9B56C4F81A0F9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000685 Genomic DNA. Translation: ABQ04430.1.
    RefSeqiWP_012023478.1. NC_009441.1.
    YP_001193749.1. NC_009441.1.

    Genome annotation databases

    EnsemblBacteriaiABQ04430; ABQ04430; Fjoh_1398.
    GeneIDi5093181.
    KEGGifjo:Fjoh_1398.
    PATRICi21897121. VBIFlaJoh53613_1437.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000685 Genomic DNA. Translation: ABQ04430.1 .
    RefSeqi WP_012023478.1. NC_009441.1.
    YP_001193749.1. NC_009441.1.

    3D structure databases

    ProteinModelPortali A5FK35.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 376686.Fjoh_1398.

    Protein family/group databases

    CAZyi GH13. Glycoside Hydrolase Family 13.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ04430 ; ABQ04430 ; Fjoh_1398 .
    GeneIDi 5093181.
    KEGGi fjo:Fjoh_1398.
    PATRICi 21897121. VBIFlaJoh53613_1437.

    Phylogenomic databases

    eggNOGi COG0366.
    HOGENOMi HOG000273912.
    KOi K01176.
    OMAi GQNWHSF.
    OrthoDBi EOG65QWH3.

    Enzyme and pathway databases

    BioCyci FJOH376686:GIXN-1427-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis."
      McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B., Rhodes R.G., Goltsman E., Wang W., Xu J., Hunnicutt D.W., Staroscik A.M., Hoover T.R., Cheng Y.Q., Stein J.L.
      Appl. Environ. Microbiol. 75:6864-6875(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17061 / DSM 2064 / UW101Imported.

    Entry informationi

    Entry nameiA5FK35_FLAJ1
    AccessioniPrimary (citable) accession number: A5FK35
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3