A5FJM0 (A5FJM0_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Candidate beta-glycosidase; Glycoside hydrolase family 30 EMBL ABQ04594.1

Gene names

Ordered Locus Names:

Fjoh_1562

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	487 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ04594.1
Molecular function	Glycosidase EMBL ABQ04594.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro lysosome organization Inferred from electronic annotation. Source: InterPro sphingolipid metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro glucosylceramidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 21	21	Potential EMBL ABQ04594.1
	Chain	22 – 487	466	Potential EMBL ABQ04594.1		PRO_5000244020

Sequences

	Sequence		Length	Mass (Da)
	A5FJM0 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: AA040C80867AC991	FASTA	487	55,280
	10 20 30 40 50 60 MKKMKFIITT CLCFSLSVFS QTNPKKQVQK FTTANKKITV YTTAADTNLK LTATDNLSFT 70 80 90 100 110 120 ASKQPVETEI SVFVEPSKKF QTFMGIGGAV TDASAEIFAK LSKEKQTEFL NAYYDAQKGI 130 140 150 160 170 180 GYSLLRTTIQ SSDFSSGSYS YIEEGDKDLK TFSIDHDRKY RIPLIKDVIK TAGGKLLTYA 190 200 210 220 230 240 TPWSPNAFMK SNKSVLKGGK LLPEYFQPWA NFYAKFIKAY NKEGIPIWGT SVQNEPMATQ 250 260 270 280 290 300 TWESCLYTAE EERDYIKNYL GPTLKKEGLG DVKIIAWDHN RDLMVQRANV IFSDPEASKY 310 320 330 340 350 360 VWGLGFHWYE TWTGAQPMFE NVARVHEAYP DKKLMFTEGC VERFDAAKYQ FWPNAERYGT 370 380 390 400 410 420 SMINDFNNGT VAWTDWNILL DQFGGPNHVG NFCFAPIHAD TVTGELIYTP SYYYIGHFSK 430 440 450 460 470 480 FIRPNAVRVS SSVSRSYLLS TSFLNTDGKM ATIVMNHTDN EITYNFIIAE EKAIVKIPAH AIQTLVY

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ04594.1.
RefSeq	YP_001193913.1. NC_009441.1.
3D structure databases
ProteinModelPortal	A5FJM0.
ModBase	Search...
Protein-protein interaction databases
STRING	A5FJM0.
Protein family/group databases
CAZy	GH30. Glycoside Hydrolase Family 30.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5092666.
GenomeReviews	Gene locus Fjoh_1562 in contig CP000685_GR.
KEGG	fjo:Fjoh_1562.
PATRIC	21897463. VBIFlaJoh53613_1607.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG5520.
HOGENOM	HBG380604.
OMA	WSAPAFM.
ProtClustDB	CLSK2537629.
Family and domain databases
InterPro	IPR013780. Glyco_hydro_13_b. IPR001139. Glyco_hydro_30. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01201.
PANTHER	PTHR11069. Glyco_hydro_30. 1 hit.
Pfam	PF02055. Glyco_hydro_30. 1 hit. [Graphical view]
PRINTS	PR00843. GLHYDRLASE30.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5FJM0_FLAJ1

Accession

Primary (citable) accession number: A5FJM0

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)