A5FJC8 (A5FJC8_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ABQ04688.1
EC=4.1.2.4 EMBL ABQ04688.1

Gene names

Ordered Locus Names:

Fjoh_1656

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	259 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase SAAS SAAS002915 EMBL ABQ04688.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5FJC8 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 11D254DECF9DBD09	FASTA	259	28,503
	10 20 30 40 50 60 MYFCAIRSNF YIMNVKQYLD STYLKTASQA GISEEDNVVV VKNTIEEAIT ESFKLIMIRP 70 80 90 100 110 120 EYVSLAKDMI LKANSTLLVG TVIDFPEGKS SLETKIKEAN EAIENGADDL DFVCNYEAFK 130 140 150 160 170 180 NGDVDLIKQE ILIGTQIGLA NNKTVKWIIE VAALTDKEII QLCALIKNVV ISNFKEEDYA 190 200 210 220 230 240 SVFVKSSTGF YKTENNLPNG ATIPTIIIML ENASPLPVKA AGGVRSYEDA VEMIRLGVKR 250 IGTSAAKAIA NGENTTNQY

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ04688.1.
RefSeq	YP_001194007.1. NC_009441.1.
3D structure databases
ProteinModelPortal	A5FJC8.
ModBase	Search...
Protein-protein interaction databases
STRING	A5FJC8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5091115.
GenomeReviews	Gene locus Fjoh_1656 in contig CP000685_GR.
KEGG	fjo:Fjoh_1656.
PATRIC	21897657. VBIFlaJoh53613_1702.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0274.
HOGENOM	HBG636421.
OMA	INTQVAV.
ProtClustDB	CLSK854510.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5FJC8_FLAJ1

Accession

Primary (citable) accession number: A5FJC8

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)