A5FI56 (A5FI56_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-agarase-like protein; Glycoside hydrolase family 50 EMBL ABQ05111.1

Gene names

Ordered Locus Names:

Fjoh_2081

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	471 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ05111.1
Molecular function	Hydrolase EMBL ABQ05111.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABQ05111.1
	Chain	23 – 471	449	Potential EMBL ABQ05111.1		PRO_5000243866

Sequences

	Sequence		Length	Mass (Da)
	A5FI56 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 84D1F8BCC19D0686	FASTA	471	55,454
	10 20 30 40 50 60 MNLKKHSVYA LFGFLSLTLH AQHKNTYQKV EARQNALDPK WVAYDAKTID KLPGFKIKKE 70 80 90 100 110 120 SSASVYGSSK MWQKEATGFF RTEKIDNRWW IIDPEGYPYI YKGIAVFNAG RSENQQKAFD 130 140 150 160 170 180 KKYGSKENWV KQESKLLRDN GFNGVGAWSN VDLVRNAENP LVYTVIISPM GMYHSDHIKK 190 200 210 220 230 240 FGGKYKEASW QNYRFDLVMV FDKEFDSYIE KSVKEIAQYK DDKYLMGYFT DNELPWYNDA 250 260 270 280 290 300 LDKHLTLLAK DEQGYIAAKE WFDKRKGFNA SISDITQEDR MAFTAFYFET YMKKVTEALR 310 320 330 340 350 360 KADPNHMYLG CRFNQDKDQE LTNPEIFKVA GKYMDIISIN HYRKWEPNQD LMNKWGEWSG 370 380 390 400 410 420 KPFLITEWYT KGEDSGLPNN TGAGWLVRTQ KERGLFYQNF TLELLKNKNS VGWHWFKYMD 430 440 450 460 470 NDPQDLSTDY SNRDSNKGIV NSNFEPYLPL LKEMKVINDS AYELTRYFDK M

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ05111.1.
RefSeq	YP_001194430.1. NC_009441.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5FI56.
Protein family/group databases
CAZy	GH50. Glycoside Hydrolase Family 50.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5092094.
GenomeReviews	Gene locus Fjoh_2081 in contig CP000685_GR.
KEGG	fjo:Fjoh_2081.
PATRIC	21898573. VBIFlaJoh53613_2144.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG10914.
HOGENOM	HBG478212.
OMA	RFLSKGV.
ProtClustDB	CLSK849337.
Family and domain databases
InterPro	IPR017853. Glycoside_hydrolase_SF. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5FI56_FLAJ1

Accession

Primary (citable) accession number: A5FI56

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)