A5FI54 (A5FI54_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Candidate xylanase; Glycoside hydrolase family 10 EMBL ABQ05109.1
EC=3.2.1.8 EMBL ABQ05109.1

Gene names

Ordered Locus Names:

Fjoh_2079

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	364 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Xylan degradation EMBL ABQ05109.1
Domain	Signal EMBL ABQ05109.1
Molecular function	Glycosidase EMBL ABQ05109.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABQ05109.1
	Chain	23 – 364	342	Potential EMBL ABQ05109.1		PRO_5000243865

Sequences

	Sequence		Length	Mass (Da)
	A5FI54 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: B7256BD531A646D4	FASTA	364	41,334
	10 20 30 40 50 60 MKSKQYILGV LTALLFASCS NDEKVVLKYA DEGDSGNPNP ITQTLKEKAK FKIGAAVKMK 70 80 90 100 110 120 DLQNEANYKN AVLKHYNQIT AEFEMKMASI WTSSTAYNYT AADYLVGFAQ DNKMEVHGHT 130 140 150 160 170 180 LVWYDSFPEW FKKAQYDSIA FEAKVKVYIT DVVGRYKGKV KSWDVVNEVF ADGGAMRNET 190 200 210 220 230 240 VINSLFKDPI GFYGRCFRYA KAADPDAKLF YNDYSVVLDA GKRASIKKMV ARFKANGVPI 250 260 270 280 290 300 DGLGDQFHYA TDTNRQTMKT GFTDLASTGL LIHISELDIK VNTGKSDSYV FNDVENQKQA 310 320 330 340 350 360 ETYKYITTMY EELPQTQKFA ISTWGVTDKY TWLTSFWHSK EYPLLLDADY NKKPAYQGFL DGLK

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ05109.1.
RefSeq	YP_001194428.1. NC_009441.1.
3D structure databases
ProteinModelPortal	A5FI54.
ModBase	Search...
Protein-protein interaction databases
STRING	A5FI54.
Protein family/group databases
CAZy	GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5092092.
GenomeReviews	Gene locus Fjoh_2079 in contig CP000685_GR.
KEGG	fjo:Fjoh_2079.
PATRIC	21898569. VBIFlaJoh53613_2142.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3693.
HOGENOM	HBG626574.
OMA	MKWDAIE.
ProtClustDB	CLSK2788102.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00591. GLYCOSYL_HYDROL_F10. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5FI54_FLAJ1

Accession

Primary (citable) accession number: A5FI54

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)