A5FGT3 (A5FGT3_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Candidate pectin or pectate lyase; Polysaccharide lyase family 1 EMBL ABQ05593.1

Gene names

Ordered Locus Names:

Fjoh_2566

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	368 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ05593.1
Molecular function	Lyase EMBL ABQ05593.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential EMBL ABQ05593.1
	Chain	25 – 368	344	Potential EMBL ABQ05593.1		PRO_5000243740

Sequences

	Sequence		Length	Mass (Da)
	A5FGT3 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 7AFC740DF94D5C97	FASTA	368	39,130
	10 20 30 40 50 60 MNLKLKLSMF LLTLTFGFTA CNSEEIASNT EAKTEAVTET PSGNLTAKIG NCAEVPGWAS 70 80 90 100 110 120 QNGGTTGGGS AAETTVTTYA QLKSAIENSS VKVIKISGTI TVTTRLSFQD QTGKTIYGAN 130 140 150 160 170 180 GAKLVSTNQT KDASGIINIK RCKNIIIRNL IFEGPGAYDT DGWDNAILDE CTNVWVDHCE 190 200 210 220 230 240 FRDGVDGNFD IKNKSDYISV TYSKFHYLKP PKAGGSGGSD DHRYSNLIGS SDGATGDRGK 250 260 270 280 290 300 LRITFARCWW APGCKERMPR VRFGKVHIVN SFFNSTVSNK CIAAGFEADI RVESNVFEGV 310 320 330 340 350 360 KTPIDLMTGY TAVTATDNVF TSVSGNQAGS GTAFTPPYSI VKLNKTAVKA DISANAGATL GGNICGSF

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ05593.1.
RefSeq	YP_001194912.1. NC_009441.1.
3D structure databases
ProteinModelPortal	A5FGT3.
ModBase	Search...
Protein-protein interaction databases
STRING	A5FGT3.
Protein family/group databases
CAZy	PL1. Polysaccharide Lyase Family 1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5091080.
GenomeReviews	Gene locus Fjoh_2566 in contig CP000685_GR.
KEGG	fjo:Fjoh_2566.
PATRIC	21899577. VBIFlaJoh53613_2640.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3866.
OMA	NDGAVDI.
ProtClustDB	CLSK2537712.
Family and domain databases
InterPro	IPR002022. Amb_allergen. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KO	K01728.
Pfam	PF00544. Pec_lyase_C. 1 hit. [Graphical view]
SMART	SM00656. Amb_all. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5FGT3_FLAJ1

Accession

Primary (citable) accession number: A5FGT3

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)