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A5FG96 (GLGA_FLAJ1) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Fjoh_2742
OrganismFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]
Taxonomic identifier376686 [NCBI]
Taxonomic lineageBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium

Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 473473Glycogen synthase HAMAP-Rule MF_00484
PRO_1000081324

Sites

Binding site151ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A5FG96 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 661AF66E062A304D

FASTA47353,910
        10         20         30         40         50         60 
MEIFHISAEC YPMAKVGGLA DVVGALPKYQ KNAGNDVRVV VPAYDTKFKK ENNFECVHWG 

        70         80         90        100        110        120 
TVKLGNFNFP FSVLKESSDK LGYELYLIEI KELFNRPNVY GYEDDIERFL SFQIAVLDWI 

       130        140        150        160        170        180 
IARNKVPDII NCHDHHTGLI PFLLQFAYKY ENLKDVKTVI TIHNGLYQGW FGFDKLYYLP 

       190        200        210        220        230        240 
EFDLKHIGFL EWNNCINSLA VGVKCANAVT TVSPSYLNEI NYSANGLESL FNSVRNKSKG 

       250        260        270        280        290        300 
ILNGIDIEIW NPLKDQMIAA NYSIENFEIG KQKNKEKLCE QFELDPSKPL FSFIGRLFEE 

       310        320        330        340        350        360 
KGGDLLPQAS ALALSEHFEE INILILGSGN AEIESQLTQL RNDYKGNYNV FIGYNEELAH 

       370        380        390        400        410        420 
LIYAGSDYIL MPSRVEPCGL NQMYAMRYGT IPIVRRTGGL RDTVIDFGDD GNGICHDQAS 

       430        440        450        460        470 
VGDICYSINR AVKLYDDKIS FNTVLRRGMA ADHSWERVCQ EYIEIYNLII QQK 

« Hide

References

[1]"Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis."
McBride M.J., Xie G., Martens E.C., Lapidus A., Henrissat B., Rhodes R.G., Goltsman E., Wang W., Xu J., Hunnicutt D.W., Staroscik A.M., Hoover T.R., Cheng Y.Q., Stein J.L.
Appl. Environ. Microbiol. 75:6864-6875(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000685 Genomic DNA. Translation: ABQ05764.1.
RefSeqYP_001195083.1. NC_009441.1.

3D structure databases

ProteinModelPortalA5FG96.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING376686.Fjoh_2742.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ05764; ABQ05764; Fjoh_2742.
GeneID5090538.
KEGGfjo:Fjoh_2742.
PATRIC21899973. VBIFlaJoh53613_2832.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMAPYHDESQ.
OrthoDBEOG6JTC6Z.

Enzyme and pathway databases

BioCycFJOH376686:GIXN-2806-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_FLAJ1
AccessionPrimary (citable) accession number: A5FG96
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways