A5FF80 (A5FF80_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Candidate beta-galactosidase; Glycoside hydrolase family 2 EMBL ABQ06135.1

Gene names

Ordered Locus Names:

Fjoh_3118

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	1043 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS023230

Ontologies

Keywords
Domain	Signal EMBL ABQ06135.1
Molecular function	Glycosidase SAAS SAAS023230 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular function	beta-galactosidase activity Inferred from electronic annotation. Source: InterPro carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 22	22	Potential EMBL ABQ06135.1
	Chain	23 – 1043	1021	Potential EMBL ABQ06135.1		PRO_5000243607

Sequences

	Sequence		Length	Mass (Da)
	A5FF80 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 58D9657892CC811D	FASTA	1,043	120,039
	10 20 30 40 50 60 MQKTKIFFIS LLLLFSAGIW AQEKDRNDWE NPEVFQINRE PARAAFLPYA DETSAIMDKY 70 80 90 100 110 120 ENSPWYFSLN GTWKFSWSQT PDERPKDFYK TDFSTLHWKD LQVPSNWELH GYGVPIYTNI 130 140 150 160 170 180 TYPFEKNPPF INHWDNPVGS YKRDFVLPEN WKNRHVFLHF EAGTAAMYIW VNGEKVGYTE 190 200 210 220 230 240 NTKSPAEFDI SKYLKPGKNN LAVEVYRWSD GSYLEDQDMW RLSGIDRNVY LYSTEDVRIS 250 260 270 280 290 300 DFFAKPDLDA KYKNGSLNVE VSLKNLTSKA INNQKLIAKL VDASGKNVFT KEINVNFEAS 310 320 330 340 350 360 KVQTINFAQN ISSPKLWSSE TPNLYTLLLT LKNQKGEIIE TVSTQIGFRK VELKGGQLLV 370 380 390 400 410 420 NGVRLMVHGV NIHEHNPETG HYQDEATMMK DIKMMKQLNI NSVRCSHYPN NILWVKLCNK 430 440 450 460 470 480 YGLFLVDEAN IESHGMGVEG QPLKWMNPKT NPGYLPEWRE AHLDRIYSLV ERDKNMPSVI 490 500 510 520 530 540 IWSLGNESAN GPVFHEAYKW IKKRDITRLV QFEQAKENEN TDIVCPMYPT IEYMKEYAAR 550 560 570 580 590 600 KEVSRPYIMC EYSHAMGNSS GNFQEYWDII RGSKNMQGGF IWDWVDQGFQ GIDEAGRKYW 610 620 630 640 650 660 TYGGDMGSQN YLNDENFCHN GLVYPDRTPH PGAFEVKKVY QNILFKAVDI KNGVIEINND 670 680 690 700 710 720 FGFTNLNKYN FRYEVLENGK VIKEGTFNVV LDPKTKKQFK LDLPKLQSKA GTEYLLNVFA 730 740 750 760 770 780 HTKTGSELLP QNFEIAKEQF VIEDDKYFEK SEKVNTAKVQ DEKDQFVLTS DNVTVKISKS 790 800 810 820 830 840 TGLISYYSLK GEEYFKQYPE PNFWRAPTDN DIGNKMQIRT NVWRTAGKNT SLESIQQTEE 850 860 870 880 890 900 NGQKYIVAKL KLSDVASDYT IKYALANDGA LEIQASYKKG ANPVPELPRF GMIFTLKNTL 910 920 930 940 950 960 ENLDYYGRGP LENYPDRKTS SLKGIYSSKV ADQYVPYTRP QENGYKTDIR WFKLSGNSGN 970 980 990 1000 1010 1020 GLEIKGLQPL AMSTLNNYPS DFDGGISKKN IHSSDITPRN EVVVCVDLTQ RGLGGDNSWG 1030 1040 LPPHEQYVLT KSEYSYGFVI KPL

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ06135.1.
RefSeq	YP_001195454.1. NC_009441.1.
3D structure databases
ProteinModelPortal	A5FF80.
ModBase	Search...
Protein-protein interaction databases
STRING	A5FF80.
Protein family/group databases
CAZy	GH2. Glycoside Hydrolase Family 2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5093114.
GenomeReviews	Gene locus Fjoh_3118 in contig CP000685_GR.
KEGG	fjo:Fjoh_3118.
PATRIC	21900775. VBIFlaJoh53613_3230.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3250.
HOGENOM	HBG670643.
OMA	DASWLED.
ProtClustDB	CLSK854651.
Family and domain databases
InterPro	IPR004199. B-gal_small/dom_5. IPR008979. Galactose-bd-like. IPR011013. Glyco_hydro-type_carb-bd. IPR014718. Glyco_hydro-type_carb-bd_sub. IPR006101. Glyco_hydro_2. IPR013812. Glyco_hydro_2/20_Ig-like. IPR023230. Glyco_hydro_2_CS. IPR006102. Glyco_hydro_2_Ig-like. IPR006104. Glyco_hydro_2_N. IPR006103. Glyco_hydro_2_TIM. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:2.60.40.320. Glyco_hydro_2/20_Ig-like. 2 hits. G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01190.
Pfam	PF02929. Bgal_small_N. 1 hit. PF00703. Glyco_hydro_2. 1 hit. PF02836. Glyco_hydro_2_C. 1 hit. PF02837. Glyco_hydro_2_N. 1 hit. [Graphical view]
PRINTS	PR00132. GLHYDRLASE2.
SMART	SM01038. Bgal_small_N. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit. SSF49303. Glyco_hydro_2Ig. 2 hits. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00719. GLYCOSYL_HYDROL_F2_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5FF80_FLAJ1

Accession

Primary (citable) accession number: A5FF80

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	January 25, 2012
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)