Skip Header

Contribute Send feedback
Read comments (?) or add your own

A5FED6 (A5FED6_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Argininosuccinate lyase HAMAP MF_00006
Short name=ASAL HAMAP MF_00006
EC=4.3.2.1 HAMAP MF_00006
Alternative name(s):
Arginosuccinase HAMAP MF_00006
Gene names
Name:argH HAMAP MF_00006
Ordered Locus Names:Fjoh_3427
OrganismFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]
Taxonomic identifier376686 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length426 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine. HAMAP MF_00006

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. HAMAP MF_00006

Subcellular location

Cytoplasm By similarity HAMAP MF_00006.

Sequence similarities

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. HAMAP MF_00006

Ontologies

Keywords
   Biological processAmino-acid biosynthesis
Arginine biosynthesis HAMAP MF_00006
   Cellular componentCytoplasm HAMAP MF_00006
   Molecular functionLyase HAMAP MF_00006 EMBL ABQ06441.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processarginine biosynthetic process via ornithine

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionargininosuccinate lyase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5FED6 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 3587B04147206C46

FASTA42647,432
        10         20         30         40         50         60 
MKLWEKGIPT DKQIEQFTVG NDRELDLVLA KYDALGSIAH AKMLGQIGLL TEEETTSLVD 

        70         80         90        100        110        120 
ALNEIIADIV VGNFEIEDSF EDVHSKIEYL LTVKLGDAGK KIHTARSRND QVLVDVHLYL 

       130        140        150        160        170        180 
KDELKVIKEQ VKTLFDLLME SAEKHQNVLL PGYTHLQIAM PSSFGMWFSA YAESLIDDVT 

       190        200        210        220        230        240 
MLNAASKIVD QNPLGSAAGY GSSFPINRTF TTKELGFETL KYNAVAAQMS RGKAEKTVAF 

       250        260        270        280        290        300 
AMTSVAGTLS KFAMDVCLYM SQNFDFIGLP AHLTTGSSIM PHKKNPDVFE LIRGKCNKIQ 

       310        320        330        340        350        360 
ALPYEITLIT NNLPSGYHRD LQLLKEGLFP AIQNLKACLD IAIFSIKDIT VKDHILEDKK 

       370        380        390        400        410        420 
YDYLFTVDTL NEMVVEGMPF RDAYKAVAEQ LEAGTYKSPK ATKHTHEGSI NNLCLDAIKD 


KMKAAF

« Hide

References

[1]"Complete sequence of Flavobacterium johnsoniae UW101."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000685 Genomic DNA. Translation: ABQ06441.1.
RefSeqYP_001195760.1. NC_009441.1.

3D structure databases

ProteinModelPortalA5FED6.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5FED6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5093675.
GenomeReviewsGene locus Fjoh_3427 in contig CP000685_GR.
KEGGfjo:Fjoh_3427.
PATRIC21901411. VBIFlaJoh53613_3548.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0165.
HOGENOMHBG539632.
OMAKKNPDVF.
ProtClustDBPRK00855.

Family and domain databases

HAMAPMF_00006. Arg_succ_lyase.
[Tree]
InterProIPR009049. Argininosuccinate_lyase.
IPR003031. D_crystallin.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR008948. L-Aspartase-like.
IPR022761. Lyase1_N.
[Graphical view]
KOK01755.
PANTHERPTHR11444:SF3. argH. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00838. ArgH. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5FED6_FLAJ1
AccessionPrimary (citable) accession number: A5FED6
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info