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A5FCI1 (A5FCI1_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-L-rhamnosidase-like protein; Glycoside hydrolase family 78 EMBL ABQ07088.1
Gene names
Ordered Locus Names:Fjoh_4080
OrganismFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]
Taxonomic identifier376686 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length916 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABQ07088.1
   Molecular functionHydrolase EMBL ABQ07088.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionhydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL ABQ07088.1
Chain23 – 916894 Potential EMBL ABQ07088.1
PRO_5000243366

Sequences

Sequence LengthMass (Da)Tools
A5FCI1 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: AB059143D8B24AB8

FASTA916104,388
        10         20         30         40         50         60 
MKKFFLHLTL IISLFTISAK AQTKIIVSDL KCEMLTNPEG IDVLQPRLSW KIKADINDVK 

        70         80         90        100        110        120 
QTHYQILASS SLEKLNAGNA DLWDSGKVQS DESVNVIYNG KKLKDRQDVY WKVMIFTNKG 

       130        140        150        160        170        180 
EIQSKETAHF SIGILTYADW KSTRWIGYEK TSPGDSISQY SRLSARYLRK EIDLKKKVKS 

       190        200        210        220        230        240 
AKVYIMGMGL YELYINGNKI GDQVLAPVPT DYTKNVKYNV FDVTSQLQEG KNALGTILGN 

       250        260        270        280        290        300 
GRFFTMRQDY KPYKIKTFGY PKMALQLFVE YTDGSKDVIR TDDTWKITTD GPILSNNEYD 

       310        320        330        340        350        360 
GEEYDARKEM KGWNTINFND KKWLSAEYVQ EPGGFYEGQM SANMKIKREV KPISIKQTSK 

       370        380        390        400        410        420 
GTYILDMGQN MVGWLQLKVK GNAGDKITMK FAESLQPDGS LYIANLRDAK TTDIYTLKGE 

       430        440        450        460        470        480 
GEEVWEPRFI FHGFRFVEIS GFKTKPTLEN FVGKVVYDDI ATTGTFDSSN PIMNQIFKNA 

       490        500        510        520        530        540 
WWGISGNYKG MPIDCPQRNE RQPWLGDRTT GAYGESFLFD NQTLYAKWLD DIKNSQTIDG 

       550        560        570        580        590        600 
GLPDVAPAFW RYYGDNVTWP GTYITVADML YQQFGDKKVV EKQYPSMKKW MDYMEENYLV 

       610        620        630        640        650        660 
DDIMTKDKYG DWCVPPESLE LIRSKDPSRL TDGELISSAF YYQLLNIMKK FAVIANAQND 

       670        680        690        700        710        720 
IKHYDELASR IKKAFNAKYF NPSKNNYANN TVTANLLPLT FGMVPEELQQ KVFENLVHEV 

       730        740        750        760        770        780 
EVTKNGHVST GVIGTQFLMR TLTNFGRGDL AFKLASNKTY PSWGYMVENG ATTIWELWNG 

       790        800        810        820        830        840 
NTADPAMNSQ NHVMLLGDLL IWYYENMAGI KSNPETPGFK QIIMKPDFNA GLTYVNASYE 

       850        860        870        880        890        900 
SIYGTIKSDW KKDKKALVWN ITIPANTSAV VYLPTHNASS VTVNKQKLAQ FSGTYKIEDN 

       910 
STVLTLPSGT YVLNMK

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References

[1]"Complete sequence of Flavobacterium johnsoniae UW101."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000685 Genomic DNA. Translation: ABQ07088.1.
RefSeqYP_001196407.1. NC_009441.1.

3D structure databases

ProteinModelPortalA5FCI1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5FCI1.

Protein family/group databases

CAZyGH78. Glycoside Hydrolase Family 78.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5090806.
GenomeReviewsGene locus Fjoh_4080 in contig CP000685_GR.
KEGGfjo:Fjoh_4080.
PATRIC21902761. VBIFlaJoh53613_4223.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG10735.
HOGENOMHBG696677.
OMAHYDELAS.
ProtClustDBCLSK822495.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR016007. Alpha_rhamnosid.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
[Graphical view]
KOK05989.
PfamPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
PIRSFPIRSF010631. A-rhamnsds. 1 hit.
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5FCI1_FLAJ1
AccessionPrimary (citable) accession number: A5FCI1
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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