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A5FCH3 (A5FCH3_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-L-rhamnosidase-like proteins; Glycoside hydrolase family 78 EMBL ABQ07093.1
Gene names
Ordered Locus Names:Fjoh_4085
OrganismFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]
Taxonomic identifier376686 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length926 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ABQ07093.1
   Molecular functionHydrolase EMBL ABQ07093.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionhydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL ABQ07093.1
Chain23 – 926904 Potential EMBL ABQ07093.1
PRO_5000243359

Sequences

Sequence LengthMass (Da)Tools
A5FCH3 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 7652F0C0E87515EB

FASTA926105,660
        10         20         30         40         50         60 
MKNFKNILLG LSFLITFISN GQILPVRLTT EMAENPLAVI ENQPKFSWQL ISKESDVSQV 

        70         80         90        100        110        120 
AYLILVASSE EKLNNDDGDI WNSGRVNTDK NLHIVYSGKP LKSETKYFWK VKVWNQLGKI 

       130        140        150        160        170        180 
SKWSKTASFR TASLESDLNP IWIGAITKAD SHLPEGRNYH TATFNREKKM SFINASDSLA 

       190        200        210        220        230        240 
RRSIMLRKPF EVEKAVKEAV VYISGLGHYE LTINGKKVGN SQFAPLWTDY DKTVNYNVYE 

       250        260        270        280        290        300 
LSAKEFQKGD NVIGVLLGNG MYNTLAERYT KFFVSFGPPT LFFKMKIKYN DGSEEIIKSD 

       310        320        330        340        350        360 
RTWKYSKSPI TYNSIFGGED YNANLEQKDW NRKGFKDRDW KKVVIQEAPK GILRPQTAPP 

       370        380        390        400        410        420 
VTIQKQYEVK TVKELKPNFY VFDMGQNLSG FPTIKVKGKR GQTIRVWVAE GLNEEGTIAQ 

       430        440        450        460        470        480 
GRSGKPYYYD YTLKGKDVEE WTPKFSFYGY QYVQIENINY KEDKNKEFPT LVDLKSNFIY 

       490        500        510        520        530        540 
NSAGEAGSFA CSNEIFNKTH ELINNSIKSN FQSVFTDCPQ REKLGWLEEI QLNGPSLMFN 

       550        560        570        580        590        600 
YNLQTFLPAT MQNISDSQRE NGLIPTIVPE YVIFGGDFTD SPEWGVTGVI LPWMYYEYYG 

       610        620        630        640        650        660 
DASLLEKYFP VMKNYVDYLG TKATNHIVSH GLGDWYDYGT HPAGYSKNSP IALSATSHYY 

       670        680        690        700        710        720 
YGAFLVAKAS KLLGKTEDFE KYNTLASEIK TAFNAAFFNE ETKQYGTSSQ FSNAVPIFMD 

       730        740        750        760        770        780 
IVEPQYKEAV MQNLLADIKE KGDRLTTGDV GNRYLFQTLA RNGENETMYR MHNHYDAPGY 

       790        800        810        820        830        840 
GFQIKFGLTT LTEQWDPRKG NSWNHFMLGQ IEEWFYQSLA GIMSDPEKPG FKHFFIQPEV 

       850        860        870        880        890        900 
VGDMTFAKAD YQSVYGKIAS SWEKKDGKFI LTVQIPVNTT ATIKLPVAKN SEIKMDGKRV 

       910        920 
RAGFDEKAQK PVLELGSGIY TIECTI

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References

[1]"Complete sequence of Flavobacterium johnsoniae UW101."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000685 Genomic DNA. Translation: ABQ07093.1.
RefSeqYP_001196412.1. NC_009441.1.

3D structure databases

ProteinModelPortalA5FCH3.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5FCH3.

Protein family/group databases

CAZyGH78. Glycoside Hydrolase Family 78.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5090811.
GenomeReviewsGene locus Fjoh_4085 in contig CP000685_GR.
KEGGfjo:Fjoh_4085.
PATRIC21902771. VBIFlaJoh53613_4228.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGNOG10735.
HOGENOMHBG346605.
OMASHHASAY.
ProtClustDBCLSK822500.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR016007. Alpha_rhamnosid.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
[Graphical view]
PfamPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
PIRSFPIRSF010631. A-rhamnsds. 1 hit.
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5FCH3_FLAJ1
AccessionPrimary (citable) accession number: A5FCH3
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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