A5FC35 (A5FC35_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Candidate rhamnogalacturonan lyase; Polysaccharide lyase family 11 EMBL ABQ07230.1

Gene names

Ordered Locus Names:

Fjoh_4222

Organism

Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]

Taxonomic identifier

376686 [NCBI]

Taxonomic lineage

Bacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length	616 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABQ07230.1
Molecular function	Lyase EMBL ABQ07230.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 19	19	Potential EMBL ABQ07230.1
	Chain	20 – 616	597	Potential EMBL ABQ07230.1		PRO_5000243308

Sequences

	Sequence		Length	Mass (Da)
	A5FC35 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 28C1CB77752765E5	FASTA	616	67,811
	10 20 30 40 50 60 MKKYILFLLL FVSLKALSQR QMENLDRGII AIKDKGQFFI SWRVLGTDPD DLAFNLYRKS 70 80 90 100 110 120 GTQKAVLLNE NPITGATNFI DAKANAKEEN TWFVKTVLKG KEAAASGSFT IPANASDKQY 130 140 150 160 170 180 LSIKLKEIEG YMANDVSVGD LNGDGKYELI VHMTGKGHDN SQTGITDPPI FQAYTLDGTF 190 200 210 220 230 240 LWQINLGKNI REGAHYTQFM VYDLDGDGFA ELVCKTADGT TDSEGNVVGD ASKDWVDRDP 250 260 270 280 290 300 DSKTYGKILK GPEYLSVFDG RTGKLIITVD YIPQRGDLAG WGGRGGSGGN DTKGNRMDRF 310 320 330 340 350 360 LACIAYLDGV HPSVVMCRGY YGRTVLAAWD FKNKKLTSKW VFDSKDAENP YSGMGNHNLT 370 380 390 400 410 420 VTDVDNDGKD EIIYGSMCVD DNGQGLYTTG FRHGDAIHVS DLDLDIPGLE VFGIHEIENG 430 440 450 460 470 480 TTGPGVTLFS AKDGKVLFTG SLNEDVGRGV ADNIDATRKG AQCWWSGSPY LHDMKGNNIG 490 500 510 520 530 540 KAPSSTNFLI YWDGDTSREL LNSNYIDKYN SGRLFTAEGA VSNNGTKSTP ALSADILGDW 550 560 570 580 590 600 REELILRSED NKELRIYSTI IPTNVKQYTL MHDPQYRLSV AWQNVGYNQP PHTSFYMGAA 610 MDPAPKPNIV LVPSKK

References

[1]

"Complete sequence of Flavobacterium johnsoniae UW101." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P. Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000685 Genomic DNA. Translation: ABQ07230.1.
RefSeq	YP_001196549.1. NC_009441.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5FC35.
Protein family/group databases
CAZy	PL11. Polysaccharide Lyase Family 11.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5092264.
GenomeReviews	Gene locus Fjoh_4222 in contig CP000685_GR.
KEGG	fjo:Fjoh_4222.
PATRIC	21903051. VBIFlaJoh53613_4368.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG04883.
HOGENOM	HBG425203.
OMA	WRIDLGR.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

A5FC35_FLAJ1

Accession

Primary (citable) accession number: A5FC35

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)