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A5FB27 (A5FB27_FLAJ1) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp HAMAP MF_01445
Alternative name(s):
t(6)A37 threonylcarbamoyladenosine biosynthesis protein HAMAP MF_01445
Gene names
Name:gcp HAMAP MF_01445
Ordered Locus Names:Fjoh_4593
OrganismFlavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) (Cytophaga johnsonae) [Complete proteome] [HAMAP]
Taxonomic identifier376686 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteriia › Flavobacteriales › Flavobacteriaceae › Flavobacterium

Protein attributes

Sequence length340 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t6A37) in tRNAs that read codons beginning with adenine By similarity. HAMAP MF_01445

Subcellular location

Cytoplasm By similarity HAMAP MF_01445 SAAS SAAS017860.

Sequence similarities

Belongs to the KAE1 / YgjD family. HAMAP MF_01445

Ontologies

Keywords
   Biological processtRNA processing HAMAP MF_01445 SAAS SAAS017860
   Cellular componentCytoplasm HAMAP MF_01445 SAAS SAAS017860
   Molecular functionHydrolase EMBL ABQ07592.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: InterPro

threonylcarbamoyladenosine biosynthetic process

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionmetalloendopeptidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5FB27 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 1E8CB05C1503AF90

FASTA34037,077
        10         20         30         40         50         60 
MQNSEVFILA IESSCDDTAA AVLHNDKVLS NVVANQLIHN QYGGVVPELA SRAHQQNIVP 

        70         80         90        100        110        120 
VIDAALRKAN VQKEQLSAIA FTQGPGLMGS LLVGSSFGKS LSLALNIPLI AVNHMHAHIL 

       130        140        150        160        170        180 
AHFIDEEGYD KPEFPFLALT ISGGHTQIVK VNSFFDMEII GETTDDAVGE AFDKSAKILG 

       190        200        210        220        230        240 
LPYPGGPLID KYAKEGNPKA FTFTKPKVPG LDFSFSGLKT AILYFIQKNK QENPNFIEEN 

       250        260        270        280        290        300 
LNDICASIQH TIIEILMDKL KLAVKETGIK QIAIGGGVSA NSGIRTTLKE SEAKYGWKTF 

       310        320        330        340 
IPKFEYTTDN AAMIGIVGYQ KYLSKRFEDS SVVSKARIQF

« Hide

References

[1]"Complete sequence of Flavobacterium johnsoniae UW101."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Pitluck S., Goltsman E., Singan V., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Xie G., McBride M., Richardson P.
Submitted (APR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17061 / DSM 2064 / UW101.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000685 Genomic DNA. Translation: ABQ07592.1.
RefSeqYP_001196911.1. NC_009441.1.

3D structure databases

ProteinModelPortalA5FB27.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5FB27.

Protein family/group databases

MEROPSM22.001.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5092904.
GenomeReviewsGene locus Fjoh_4593 in contig CP000685_GR.
KEGGfjo:Fjoh_4593.
PATRIC21903825. VBIFlaJoh53613_4750.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0533.
HOGENOMHBG304663.
OMAMEVIGQT.
ProtClustDBPRK09604.

Family and domain databases

HAMAPMF_01445. gcp.
[Tree]
InterProIPR022450. Pept_M22_O-sialoglycopept.
IPR000905. Peptidase_M22.
IPR017860. Peptidase_M22_CS.
IPR017861. Peptidase_M22_subgr.
[Graphical view]
KOK01409.
PfamPF00814. Peptidase_M22. 1 hit.
[Graphical view]
PRINTSPR00789. OSIALOPTASE.
TIGRFAMsTIGR03723. Bact_gcp. 1 hit.
TIGR00329. Gcp_kae1. 1 hit.
PROSITEPS01016. GLYCOPROTEASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5FB27_FLAJ1
AccessionPrimary (citable) accession number: A5FB27
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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