A5F9M6 (A5F9M6_CLOK5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase III, epsilon subunit related exonuclease EMBL ABQ23633.1

Gene names

Ordered Locus Names:

CKL_4034 EMBL ABQ23633.1

Encoded on

Plasmid pCKL555A EMBL ABQ23633.1

Organism

Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) [Complete proteome] [HAMAP] EMBL ABQ23633.1

Taxonomic identifier

431943 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium kluyveri

Protein attributes

Sequence length	441 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). SAAS SAAS006054

Ontologies

Keywords
Biological process	DNA replication SAAS SAAS006054
Molecular function	DNA-directed DNA polymerase SAAS SAAS006054 Exonuclease EMBL ABQ23633.1 Hydrolase Nuclease Nucleotidyltransferase Transferase
Technical term	Complete proteome Plasmid EMBL ABQ23633.1
Gene Ontology (GO)
Biological_process	DNA replication Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: InterPro DNA-directed DNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW exonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5F9M6 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 2893D0CADB6B3114	FASTA	441	50,591
	10 20 30 40 50 60 MNNSTASKSD DLQHELEQYS QSLIKAKRNA KIFGILEFIF LIPGFMNPVL AIFVFIFAIL 70 80 90 100 110 120 FFSNYIKSKK ITKIINSLNN NTNKTIVSTN KENIIPKNLS NNINKPDDIY LKKLTGKNKS 130 140 150 160 170 180 INKSQGVFDN FVVVDLETTG LEPTRDYIIE IAAAKYENNE IIDTYTTLVN PEVFIPPNIT 190 200 210 220 230 240 NINHIDNDMV KDCPEIKEVL PGFMNFIGQL PLVAHNAPFD IKFLNANLAL LGLYLNNPII 250 260 270 280 290 300 DTLPISRKLF SEIENHKLGT IKEYLNIDVQ DSHRALPDCY VCGQIYLEYS TKEKNKKALA 310 320 330 340 350 360 NIKLHSDIGL NKEECYSIVK EILKKHNKDL TYVRYGFTSN YFDIRAFYNF LRLKLKGKKY 370 380 390 400 410 420 YALLDNSLAE INSMIPDLTL KYEVAPKSES NKIRILINSP EDLYILEPII IQAFDKCIDS 430 440 MEYYRNNVSV AEKNIAEYLN T

References

[1]

"The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features." Seedorf H., Fricke W.F., Veith B., Bruggemann H., Liesegang H., Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F., Hagemeier C., Thauer R.K., Gottschalk G. Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8527 / DSM 555 / NCIMB 10680.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000674 Genomic DNA. Translation: ABQ23633.1.
RefSeq	YP_001219835.1. NC_009466.1.
3D structure databases
ProteinModelPortal	A5F9M6.
ModBase	Search...
Protein-protein interaction databases
STRING	431943.CKL_4034.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABQ23633; ABQ23633; CKL_4034.
GeneID	5172791.
KEGG	ckl:CKL_4034.
PATRIC	19461312. VBICloKlu111549_0036.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2176.
HOGENOM	HOG000274354.
KO	K02342.
OMA	KKYVLTE.
ProtClustDB	PRK06807.
Enzyme and pathway databases
BioCyc	CKLU431943:GJF1-3954-MONOMER.
Family and domain databases
InterPro	IPR006054. DnaQ. IPR006055. Exonuclease. IPR013520. Exonuclease_RNaseT/DNA_pol3. IPR012337. RNaseH-like_dom. [Graphical view]
Pfam	PF00929. RNase_T. 1 hit. [Graphical view]
SMART	SM00479. EXOIII. 1 hit. [Graphical view]
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
TIGRFAMs	TIGR00573. dnaq. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5F9M6_CLOK5

Accession

Primary (citable) accession number: A5F9M6

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)