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A5F9M6

- A5F9M6_CLOK5

UniProt

A5F9M6 - A5F9M6_CLOK5

Protein
Submitted name:

DNA polymerase III, epsilon subunit related exonuclease

Gene

CKL_4034

Organism
Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. DNA binding Source: InterPro
    2. DNA-directed DNA polymerase activity Source: UniProtKB-KW
    3. exonuclease activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    ExonucleaseImported, Hydrolase, Nuclease

    Enzyme and pathway databases

    BioCyciCKLU431943:GJF1-3954-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase III, epsilon subunit related exonucleaseImported
    Gene namesi
    Ordered Locus Names:CKL_4034Imported
    Encoded oniPlasmid pCKL555AImported
    OrganismiClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)Imported
    Taxonomic identifieri431943 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
    ProteomesiUP000002411: Plasmid pCKL555A

    Interactioni

    Protein-protein interaction databases

    STRINGi431943.CKL_4034.

    Structurei

    3D structure databases

    ProteinModelPortaliA5F9M6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG2176.
    HOGENOMiHOG000274354.
    KOiK02342.
    OMAiKKYVLTE.
    OrthoDBiEOG6ZWJJS.

    Family and domain databases

    Gene3Di3.30.420.10. 1 hit.
    InterProiIPR006054. DnaQ.
    IPR006055. Exonuclease.
    IPR013520. Exonuclease_RNaseT/DNA_pol3.
    IPR012337. RNaseH-like_dom.
    [Graphical view]
    PfamiPF00929. RNase_T. 1 hit.
    [Graphical view]
    SMARTiSM00479. EXOIII. 1 hit.
    [Graphical view]
    SUPFAMiSSF53098. SSF53098. 1 hit.
    TIGRFAMsiTIGR00573. dnaq. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A5F9M6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNNSTASKSD DLQHELEQYS QSLIKAKRNA KIFGILEFIF LIPGFMNPVL    50
    AIFVFIFAIL FFSNYIKSKK ITKIINSLNN NTNKTIVSTN KENIIPKNLS 100
    NNINKPDDIY LKKLTGKNKS INKSQGVFDN FVVVDLETTG LEPTRDYIIE 150
    IAAAKYENNE IIDTYTTLVN PEVFIPPNIT NINHIDNDMV KDCPEIKEVL 200
    PGFMNFIGQL PLVAHNAPFD IKFLNANLAL LGLYLNNPII DTLPISRKLF 250
    SEIENHKLGT IKEYLNIDVQ DSHRALPDCY VCGQIYLEYS TKEKNKKALA 300
    NIKLHSDIGL NKEECYSIVK EILKKHNKDL TYVRYGFTSN YFDIRAFYNF 350
    LRLKLKGKKY YALLDNSLAE INSMIPDLTL KYEVAPKSES NKIRILINSP 400
    EDLYILEPII IQAFDKCIDS MEYYRNNVSV AEKNIAEYLN T 441
    Length:441
    Mass (Da):50,591
    Last modified:June 12, 2007 - v1
    Checksum:i2893D0CADB6B3114
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000674 Genomic DNA. Translation: ABQ23633.1.
    RefSeqiWP_011930380.1. NC_009466.1.
    YP_001219835.1. NC_009466.1.

    Genome annotation databases

    EnsemblBacteriaiABQ23633; ABQ23633; CKL_4034.
    GeneIDi5172791.
    KEGGickl:CKL_4034.
    PATRICi19461312. VBICloKlu111549_0036.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000674 Genomic DNA. Translation: ABQ23633.1 .
    RefSeqi WP_011930380.1. NC_009466.1.
    YP_001219835.1. NC_009466.1.

    3D structure databases

    ProteinModelPortali A5F9M6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 431943.CKL_4034.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ23633 ; ABQ23633 ; CKL_4034 .
    GeneIDi 5172791.
    KEGGi ckl:CKL_4034.
    PATRICi 19461312. VBICloKlu111549_0036.

    Phylogenomic databases

    eggNOGi COG2176.
    HOGENOMi HOG000274354.
    KOi K02342.
    OMAi KKYVLTE.
    OrthoDBi EOG6ZWJJS.

    Enzyme and pathway databases

    BioCyci CKLU431943:GJF1-3954-MONOMER.

    Family and domain databases

    Gene3Di 3.30.420.10. 1 hit.
    InterProi IPR006054. DnaQ.
    IPR006055. Exonuclease.
    IPR013520. Exonuclease_RNaseT/DNA_pol3.
    IPR012337. RNaseH-like_dom.
    [Graphical view ]
    Pfami PF00929. RNase_T. 1 hit.
    [Graphical view ]
    SMARTi SM00479. EXOIII. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53098. SSF53098. 1 hit.
    TIGRFAMsi TIGR00573. dnaq. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiA5F9M6_CLOK5
    AccessioniPrimary (citable) accession number: A5F9M6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3