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A5F9M6

- A5F9M6_CLOK5

UniProt

A5F9M6 - A5F9M6_CLOK5

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Protein
Submitted name:

DNA polymerase III, epsilon subunit related exonuclease

Gene

CKL_4034

Organism
Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA-directed DNA polymerase activity Source: InterPro
  3. exonuclease activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

ExonucleaseImported, Hydrolase, Nuclease

Enzyme and pathway databases

BioCyciCKLU431943:GJF1-3954-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase III, epsilon subunit related exonucleaseImported
Gene namesi
Ordered Locus Names:CKL_4034Imported
Encoded oniPlasmid pCKL555AImported
OrganismiClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)Imported
Taxonomic identifieri431943 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium
ProteomesiUP000002411: Plasmid pCKL555A

Interactioni

Protein-protein interaction databases

STRINGi431943.CKL_4034.

Structurei

3D structure databases

ProteinModelPortaliA5F9M6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2176.
HOGENOMiHOG000274354.
KOiK02342.
OMAiKKYVLTE.
OrthoDBiEOG6ZWJJS.

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
InterProiIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamiPF00929. RNase_T. 1 hit.
[Graphical view]
SMARTiSM00479. EXOIII. 1 hit.
[Graphical view]
SUPFAMiSSF53098. SSF53098. 1 hit.
TIGRFAMsiTIGR00573. dnaq. 1 hit.

Sequencei

Sequence statusi: Complete.

A5F9M6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MNNSTASKSD DLQHELEQYS QSLIKAKRNA KIFGILEFIF LIPGFMNPVL
60 70 80 90 100
AIFVFIFAIL FFSNYIKSKK ITKIINSLNN NTNKTIVSTN KENIIPKNLS
110 120 130 140 150
NNINKPDDIY LKKLTGKNKS INKSQGVFDN FVVVDLETTG LEPTRDYIIE
160 170 180 190 200
IAAAKYENNE IIDTYTTLVN PEVFIPPNIT NINHIDNDMV KDCPEIKEVL
210 220 230 240 250
PGFMNFIGQL PLVAHNAPFD IKFLNANLAL LGLYLNNPII DTLPISRKLF
260 270 280 290 300
SEIENHKLGT IKEYLNIDVQ DSHRALPDCY VCGQIYLEYS TKEKNKKALA
310 320 330 340 350
NIKLHSDIGL NKEECYSIVK EILKKHNKDL TYVRYGFTSN YFDIRAFYNF
360 370 380 390 400
LRLKLKGKKY YALLDNSLAE INSMIPDLTL KYEVAPKSES NKIRILINSP
410 420 430 440
EDLYILEPII IQAFDKCIDS MEYYRNNVSV AEKNIAEYLN T
Length:441
Mass (Da):50,591
Last modified:June 12, 2007 - v1
Checksum:i2893D0CADB6B3114
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000674 Genomic DNA. Translation: ABQ23633.1.
RefSeqiYP_001219835.1. NC_009466.1.

Genome annotation databases

EnsemblBacteriaiABQ23633; ABQ23633; CKL_4034.
GeneIDi5172791.
KEGGickl:CKL_4034.
PATRICi19461312. VBICloKlu111549_0036.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000674 Genomic DNA. Translation: ABQ23633.1 .
RefSeqi YP_001219835.1. NC_009466.1.

3D structure databases

ProteinModelPortali A5F9M6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 431943.CKL_4034.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ23633 ; ABQ23633 ; CKL_4034 .
GeneIDi 5172791.
KEGGi ckl:CKL_4034.
PATRICi 19461312. VBICloKlu111549_0036.

Phylogenomic databases

eggNOGi COG2176.
HOGENOMi HOG000274354.
KOi K02342.
OMAi KKYVLTE.
OrthoDBi EOG6ZWJJS.

Enzyme and pathway databases

BioCyci CKLU431943:GJF1-3954-MONOMER.

Family and domain databases

Gene3Di 3.30.420.10. 1 hit.
InterProi IPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR012337. RNaseH-like_dom.
[Graphical view ]
Pfami PF00929. RNase_T. 1 hit.
[Graphical view ]
SMARTi SM00479. EXOIII. 1 hit.
[Graphical view ]
SUPFAMi SSF53098. SSF53098. 1 hit.
TIGRFAMsi TIGR00573. dnaq. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiA5F9M6_CLOK5
AccessioniPrimary (citable) accession number: A5F9M6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: October 29, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3