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A5F9M6 (A5F9M6_CLOK5) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CKL_4034 EMBL ABQ23633.1
Encoded onPlasmid pCKL555A Ref.1 EMBL ABQ23633.1
OrganismClostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) [Complete proteome] [HAMAP] EMBL ABQ23633.1
Taxonomic identifier431943 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length441 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1). SAAS SAAS013520

Sequences

Sequence LengthMass (Da)Tools
A5F9M6 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 2893D0CADB6B3114

FASTA44150,591
        10         20         30         40         50         60 
MNNSTASKSD DLQHELEQYS QSLIKAKRNA KIFGILEFIF LIPGFMNPVL AIFVFIFAIL 

        70         80         90        100        110        120 
FFSNYIKSKK ITKIINSLNN NTNKTIVSTN KENIIPKNLS NNINKPDDIY LKKLTGKNKS 

       130        140        150        160        170        180 
INKSQGVFDN FVVVDLETTG LEPTRDYIIE IAAAKYENNE IIDTYTTLVN PEVFIPPNIT 

       190        200        210        220        230        240 
NINHIDNDMV KDCPEIKEVL PGFMNFIGQL PLVAHNAPFD IKFLNANLAL LGLYLNNPII 

       250        260        270        280        290        300 
DTLPISRKLF SEIENHKLGT IKEYLNIDVQ DSHRALPDCY VCGQIYLEYS TKEKNKKALA 

       310        320        330        340        350        360 
NIKLHSDIGL NKEECYSIVK EILKKHNKDL TYVRYGFTSN YFDIRAFYNF LRLKLKGKKY 

       370        380        390        400        410        420 
YALLDNSLAE INSMIPDLTL KYEVAPKSES NKIRILINSP EDLYILEPII IQAFDKCIDS 

       430        440 
MEYYRNNVSV AEKNIAEYLN T 

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References

[1]"The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features."
Seedorf H., Fricke W.F., Veith B., Bruggemann H., Liesegang H., Strittmatter A., Miethke M., Buckel W., Hinderberger J., Li F., Hagemeier C., Thauer R.K., Gottschalk G.
Proc. Natl. Acad. Sci. U.S.A. 105:2128-2133(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 8527 / DSM 555 / NCIMB 10680.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000674 Genomic DNA. Translation: ABQ23633.1.
RefSeqYP_001219835.1. NC_009466.1.

3D structure databases

ProteinModelPortalA5F9M6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING431943.CKL_4034.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ23633; ABQ23633; CKL_4034.
GeneID5172791.
KEGGckl:CKL_4034.
PATRIC19461312. VBICloKlu111549_0036.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2176.
HOGENOMHOG000274354.
KOK02342.
OMAKKYVLTE.
OrthoDBEOG6ZWJJS.
ProtClustDBPRK06807.

Enzyme and pathway databases

BioCycCKLU431943:GJF1-3954-MONOMER.

Family and domain databases

Gene3D3.30.420.10. 1 hit.
InterProIPR006054. DnaQ.
IPR006055. Exonuclease.
IPR013520. Exonuclease_RNaseT/DNA_pol3.
IPR012337. RNaseH-like_dom.
[Graphical view]
PfamPF00929. RNase_T. 1 hit.
[Graphical view]
SMARTSM00479. EXOIII. 1 hit.
[Graphical view]
SUPFAMSSF53098. SSF53098. 1 hit.
TIGRFAMsTIGR00573. dnaq. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5F9M6_CLOK5
AccessionPrimary (citable) accession number: A5F9M6
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)