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A5F9H7 (A5F9H7_VIBC3) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
HAM1 family protein EMBL ABQ19713.1
Submitted name:
HAM1 protein EMBL ACP08519.1
Gene names
Ordered Locus Names:VC0395_A0008, VC395_0500
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length200 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

A nucleoside triphosphate + H2O = a nucleotide + diphosphate. SAAS SAAS020922

Cofactor

Binds 1 divalent metal cation ion per subunit; can use either magnesium or manganese By similarity. SAAS SAAS020922

Subunit structure

Homodimer By similarity. SAAS SAAS020922

Sequence similarities

Belongs to the HAM1 NTPase family. RuleBase RU003781

Sequences

Sequence LengthMass (Da)Tools
A5F9H7 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 44A5DBB0EF259798

FASTA20021,861
        10         20         30         40         50         60 
MKKIVLATGN QGKVREMADL LSDFGFDVVA QSEFNVPEAA ETGTTFIENA IIKARHAAQI 

        70         80         90        100        110        120 
TGLPAIADDS GLEVDYLNGA PGIYSARYAG EHASDGDNLN KLLAAMQDVP DNQRSARFHC 

       130        140        150        160        170        180 
VLVLMRHSDD PTPIVCHGKW EGKILTAPHG SNGFGYDPIF WVPEENCASA ELEPVRKKQL 

       190        200 
SHRGKALQKL FKAIEEQRTC

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References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].
[2]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000627 Genomic DNA. Translation: ABQ19713.1.
CP001235 Genomic DNA. Translation: ACP08519.1.

3D structure databases

ProteinModelPortalA5F9H7.
SMRA5F9H7. Positions 1-194.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5F9H7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus VC0395_A0008 in contig CP000627_GR.
Gene locus VC395_0500 in contig CP001235_GR.
KEGGvco:VC0395_A0008.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0127.
HOGENOMHBG697237.
OMAYSKRYDQ.
ProtClustDBPRK00120.

Enzyme and pathway databases

BioCycVCHO345073:VC0395_A0008-MONOMER.

Family and domain databases

HAMAPMF_01405. Non_canon_purine_NTPase.
[Tree]
InterProIPR002637. Ham1p-like.
IPR020922. Nucleoside-triphosphatase.
[Graphical view]
KOK02428.
PANTHERPTHR11067. Ham1p_like. 1 hit.
PfamPF01725. Ham1p_like. 1 hit.
[Graphical view]
TIGRFAMsTIGR00042. TIGR00042. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5F9H7_VIBC3
AccessionPrimary (citable) accession number: A5F9H7
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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