A5F954 (A5F954_VIBC3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endoglucanase-related protein EMBL ABQ19717.1

Gene names

Ordered Locus Names:

VC0395_A0144, VC395_0632

Organism

Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]

Taxonomic identifier

345073 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	574 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cellulase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5F954 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: F36574CA2B8A3D29	FASTA	574	65,066
	10 20 30 40 50 60 MLLLTNHIGY ETQGPKQAVL LCGQTQLMDD CVLLVCARSH QTVAKLAIEW HGKVDNWHQG 70 80 90 100 110 120 QFHRIDFSDF TTPGDYYLRL EHTHSATFTI ARGVLMQRTF SDVLHYFKSQ RCSGQFDQQD 130 140 150 160 170 180 KQVPLLSTST TADVHGGWYD ASGDVSKYLS HLSYANYLNP QQTPLVVWNM LKGLAVLQHH 190 200 210 220 230 240 SGFASFSRTR LKDEALFGAD FLRRMQNSEG FFYMTVFDKW SKDTKQREIC AYATQQGHKS 250 260 270 280 290 300 DDYQAGFRQG GGMAIAALAA AARLDTHGEF TQADYLQAAE NGYWHLKEHN LAYLNDGVEN 310 320 330 340 350 360 IIDEYCALLA CCELYRTTEN DQYLAQAREW AQRLAKRQCS DEQIAHYWSA TSNGERPYFH 370 380 390 400 410 420 ASDAGLPVIA LCEYLNIETD TANYAQLQRV VEQACQFELA ITQQVSNPFG YPRQYVKGVE 430 440 450 460 470 480 SAKRTSFFIA QDNESGYWWQ GENARLASLA SMAYLAQPHL STAIAKPLEQ WSQNALNWIV 490 500 510 520 530 540 GLNPYNMCML DGHGHNNPDY LPHLGFFNAK GGVCNGITAG FDDPRDIAFN PAGQKDDMLQ 550 560 570 NWRWGEQWIP HGAWYLLAII SQFAHFTAHG EENQ

References

[1]	"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].
[2]	Heidelberg J. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000627 Genomic DNA. Translation: ABQ19717.1. CP001235 Genomic DNA. Translation: ACP08650.1.
3D structure databases
ProteinModelPortal	A5F954.
ModBase	Search...
Protein-protein interaction databases
STRING	A5F954.
Protein family/group databases
CAZy	GH9. Glycoside Hydrolase Family 9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GenomeReviews	Gene locus VC0395_A0144 in contig CP000627_GR. Gene locus VC395_0632 in contig CP001235_GR.
KEGG	vco:VC0395_A0144.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG19053.
HOGENOM	HBG298605.
OMA	YFHAAEA.
ProtClustDB	CLSK874038.
Enzyme and pathway databases
BioCyc	VCHO345073:VC0395_A0144-MONOMER.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR001701. Glyco_hydro_9. IPR004197. Glyco_hydro_9_Ig-like. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
Pfam	PF02927. CelD_N. 1 hit. PF00759. Glyco_hydro_9. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5F954_VIBC3

Accession

Primary (citable) accession number: A5F954

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	July 27, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)