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A5F7M7 (A5F7M7_VIBC3) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.7.3.- EMBL ABQ20966.1
Gene names
Name:vieS EMBL ABQ20966.1
Ordered Locus Names:VC0395_A1259, VC395_1770
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length1146 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains histidine kinase domain. SAAS SAAS003661

Sequences

Sequence LengthMass (Da)Tools
A5F7M7 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: F83EE1518C838948

FASTA1,146129,646
        10         20         30         40         50         60 
MPYWGGTGQE PIGIEHDFAS GIAKELGINI EYKGFDTIEA LLNAVSTGKA DMAIGFGQTL 

        70         80         90        100        110        120 
AREGKFLFSK PLYENVRVIW LRDKAMEEKP FASLKWVCIQ GTSYCEILKD RGYPNIIMAR 

       130        140        150        160        170        180 
NYSSSVEMIR QGIADATVTN YVSLNHYLSQ KRLALGKVIF DPDLGVQTNR ILINNNEPLL 

       190        200        210        220        230        240 
LSAINKVIDA DKQGLTENKL NSADVYFLND QANLNILRNE NVNPVVRYTI QDDLFPMSYW 

       250        260        270        280        290        300 
DEKEKKYKGY VHDLLERIST KSILKFEFVP AYGRDVEDML RHGKVDLIPS FNMTYVDDRY 

       310        320        330        340        350        360 
FIHTGRYTDI QFGYIETTRP YTTPITGILD RTGKFNAYIA VQKNLSDVKV YRSMYDLEQA 

       370        380        390        400        410        420 
LEKGDITHGL LNKVLINQML LDGHQDAFKL SPLTEGQDLR ADMTMLVRKD ARGLQNMLQK 

       430        440        450        460        470        480 
VLATFSQQEI DEIKGAYDRV TVYFGYDKQK VLIYALIILC GLLSIGLILT LSLSRLRGKL 

       490        500        510        520        530        540 
RSSEQVAKLS TEQLRWLTEL LDAIPSMIFI SDEKDEVVLT NAAYRKIYHT CCEKGCVQPQ 

       550        560        570        580        590        600 
PECSFLALPD QHEAEFSIII QAPKSNCSIG EHYFHVTRRA ISHPINQRKY YLTLFNDITE 

       610        620        630        640        650        660 
LKETEQALRQ SNEQALQAVE ARNHFLAVVS HELRTPIAAM LGLMEILASR LKNSESQLLL 

       670        680        690        700        710        720 
TNAISSAERL KLHVNDILDF SKIEAQQLQL DIGLYNLTDE LGPLLRGFEA SAQLKEIEFD 

       730        740        750        760        770        780 
VIWSPNSLLL ANFDALRFNQ IVTNLLSNAI KFTDQGRVVF KIDVAPEMLT IVVEDTGCGM 

       790        800        810        820        830        840 
TQTQIESLFV PFAQADSTIT RRFGGTGLGM SIVANLIELM NGKIEVKSEF EQGTQIQVNL 

       850        860        870        880        890        900 
PLVTQTCDEF RGQVVAMSYR SPYMLWAKAL GMRVEENEEW VEQSGHNIYP DLLLNRLREV 

       910        920        930        940        950        960 
SNLTQAQTEP AHSRLLQGHV LVADDDAINR LLIKKQLSEL GLSATLVSDG LQAFEKLSQH 

       970        980        990       1000       1010       1020 
PEQYDLLITD CHMPHLDGFA LTRKVKQEIS LFKGAVVGCT AEDSRLAAEQ ALQAGMDKVI 

      1030       1040       1050       1060       1070       1080 
YKPYTLANLR KVLSRYLTTQ WVALPEQSWL DAYQEEEREE MAMVVAESLA QDIALLNQPD 

      1090       1100       1110       1120       1130       1140 
CDVKALAHRI KGAAGSLQLQ RLADLAKTVE KQNDPQQLVA DKQQLINAMH EVVEQAQQWL 


HQYQSE 

« Hide

References

[1]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].
[2]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000627 Genomic DNA. Translation: ABQ20966.1.
CP001235 Genomic DNA. Translation: ACP09770.1.
RefSeqYP_001217203.1. NC_009457.1.
YP_002820006.1. NC_012582.1.

3D structure databases

ProteinModelPortalA5F7M7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActA5F7M7. 1 interaction.
STRING345073.VC0395_A1259.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ20966; ABQ20966; VC0395_A1259.
ACP09770; ACP09770; VC395_1770.
GeneID5137065.
7775639.
KEGGvco:VC0395_A1259.
vcr:VC395_1770.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0784.
HOGENOMHOG000218157.
KOK07679.
OMAIGCTANA.
ProtClustDBCLSK874479.

Family and domain databases

Gene3D1.10.287.130. 1 hit.
1.20.120.160. 1 hit.
3.30.565.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR003661. EnvZ-like_dim/P.
IPR003594. HATPase_ATP-bd.
IPR000014. PAS.
IPR001638. SBP_bac_3.
IPR004358. Sig_transdc_His_kin-like_C.
IPR008207. Sig_transdc_His_kin_Hpt_dom.
IPR005467. Sig_transdc_His_kinase_core.
IPR009082. Sig_transdc_His_kinase_dimeric.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamPF02518. HATPase_c. 1 hit.
PF00512. HisKA. 1 hit.
PF01627. Hpt. 1 hit.
PF00072. Response_reg. 1 hit.
PF00497. SBP_bac_3. 2 hits.
[Graphical view]
PRINTSPR00344. BCTRLSENSOR.
SMARTSM00387. HATPase_c. 1 hit.
SM00388. HisKA. 1 hit.
SM00073. HPT. 1 hit.
SM00091. PAS. 1 hit.
SM00062. PBPb. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF47226. SSF47226. 1 hit.
SSF47384. SSF47384. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF55874. SSF55874. 1 hit.
PROSITEPS50109. HIS_KIN. 1 hit.
PS50894. HPT. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5F7M7_VIBC3
AccessionPrimary (citable) accession number: A5F7M7
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: February 19, 2014
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)