A5F7M6 (A5F7M6_VIBC3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Response regulator VieA EMBL ABQ21552.1

Gene names

Name:	vieA EMBL ABQ21552.1
Ordered Locus Names:	VC0395_A1258, VC395_1769

Organism

Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]

Taxonomic identifier

345073 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae

Protein attributes

Sequence length	584 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. SAAS SAAS016032 Contains 1 response regulatory domain.

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS016032
Ligand	DNA-binding SAAS SAAS016032
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5F7M6 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 7E31E5AEBDA85443	FASTA	584	65,564
	10 20 30 40 50 60 MKIMIVEDDR IQATSLKLKL RQLGLDDVIL AENGFAALEL CNKVGIDLMF CDIRMPQMDG 70 80 90 100 110 120 ISLLSQLSLQ APKLGVVILS AVEDTILELT HNMCSLAGFA YVDRLPKPYE VEDLQRVVEG 130 140 150 160 170 180 FQKQTEPETS HKPAITLTCD EIEQAFLHDH IFNYYQPQFD FRSGAMVGVE ALVRYEHPTH 190 200 210 220 230 240 GMLSPAVFLP LIEQCGLHEK LFLTVLEKSV SALASIGADL QLSVNISQRN LQHSICDPIL 250 260 270 280 290 300 AICERYGFPA SKLTLEMTEH EVYNRTPTSL ANLARLRMYG VGLSIDDFGT GYASLGQLAQ 310 320 330 340 350 360 LPFTELKIDR SFVHDLATNY KHQQLTNMCL LLAQSLGLHC VVEGVENEET WQYLRQLGVD 370 380 390 400 410 420 TCQGYYAAKP MPIAQLSELY TKNRRQCLGC QSMDDGWQIL LVDNHMLSAT ALQKVLNKEE 430 440 450 460 470 480 NVSKVFVAQD IEQTLHKLRD LPINLLVVES RFLSTISPAA FHELLEPYYR GALLVLHDGL 490 500 510 520 530 540 TAEAQEDEPK AIVVKANTLM ETSSRILLQA QQSNVRPQAQ QEELAQLSER ELTVAKMLVE 550 560 570 580 GLTNKEIALQ LDINQKTVST YKTRIMTKLG IKSAMELVRF VTLK

References

[1]	Heidelberg J. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].
[2]	"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000627 Genomic DNA. Translation: ABQ21552.1. CP001235 Genomic DNA. Translation: ACP09769.1.
RefSeq	YP_001217202.1. NC_009457.1. YP_002820005.1. NC_012582.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	A5F7M6. 1 interaction.
STRING	345073.VC0395_A1258.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABQ21552; ABQ21552; VC0395_A1258. ACP09769; ACP09769; VC395_1769.
GeneID	5137267. 7775638.
KEGG	vco:VC0395_A1258. vcr:VC395_1769.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2204.
HOGENOM	HOG000218159.
KO	K13246.
OMA	ARWDSPT.
ProtClustDB	CLSK794295.
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 3.20.20.450. 1 hit.
InterPro	IPR011006. CheY-like_superfamily. IPR001633. Diguanylate_PEstase_EAL_dom. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR001789. Sig_transdc_resp-reg_receiver. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00563. EAL. 1 hit. PF00196. GerE. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00052. EAL. 1 hit. SM00421. HTH_LUXR. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit. SSF52172. CheY_like. 1 hit. SSF141868. SSF141868. 1 hit.
PROSITE	PS50883. EAL. 1 hit. PS00622. HTH_LUXR_1. 1 hit. PS50043. HTH_LUXR_2. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5F7M6_VIBC3

Accession

Primary (citable) accession number: A5F7M6

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)