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A5F6T3

- A5F6T3_VIBC3

UniProt

A5F6T3 - A5F6T3_VIBC3

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Protein
Submitted name: Putative aspartate aminotransferase
Gene
VC0395_A1563, VC395_2092
Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Putative aspartate aminotransferaseImported
Gene namesi
Ordered Locus Names:VC0395_A1563Imported, VC395_2092Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)Imported
Taxonomic identifieri345073 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001630: Chromosome I, UP000000249: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi345073.VC0395_A1563.

Structurei

3D structure databases

ProteinModelPortaliA5F6T3.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0436.
HOGENOMiHOG000223042.
KOiK14260.
OMAiYQARDMR.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A5F6T3-1 [UniParc]FASTAAdd to Basket

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MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA    50
PDEILVDVIR NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI 100
GNGASELIVM AMQALLNNGD EMLVPAPDYP LWTAAVALSG GKAVHYICDE 150
EADWYPDLDD IRSKITPKTR GIVLINPNNP TGAVYSRDFL LEIIEIARKH 200
KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK AYRVCGFRGG 250
WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI 300
LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK 350
MVLDFLVQEK VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT 400
TYSQ 404
Length:404
Mass (Da):45,219
Last modified:June 12, 2007 - v1
Checksum:iA4D8BD4720B2C532
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ20404.1.
CP001235 Genomic DNA. Translation: ACP10084.1.
RefSeqiYP_001217504.1. NC_009457.1.
YP_002820320.1. NC_012582.1.

Genome annotation databases

EnsemblBacteriaiABQ20404; ABQ20404; VC0395_A1563.
ACP10084; ACP10084; VC395_2092.
GeneIDi5137464.
7775913.
KEGGivco:VC0395_A1563.
vcr:VC395_2092.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ20404.1 .
CP001235 Genomic DNA. Translation: ACP10084.1 .
RefSeqi YP_001217504.1. NC_009457.1.
YP_002820320.1. NC_012582.1.

3D structure databases

ProteinModelPortali A5F6T3.
ModBasei Search...

Protein-protein interaction databases

STRINGi 345073.VC0395_A1563.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ20404 ; ABQ20404 ; VC0395_A1563 .
ACP10084 ; ACP10084 ; VC395_2092 .
GeneIDi 5137464.
7775913.
KEGGi vco:VC0395_A1563.
vcr:VC395_2092.

Phylogenomic databases

eggNOGi COG0436.
HOGENOMi HOG000223042.
KOi K14260.
OMAi YQARDMR.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00155. Aminotran_1_2. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Heidelberg J.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.
  2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.

Entry informationi

Entry nameiA5F6T3_VIBC3
AccessioniPrimary (citable) accession number: A5F6T3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: September 3, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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