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A5F6T3 (A5F6T3_VIBC3) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VC0395_A1563 EMBL ABQ20404.1, VC395_2092 EMBL ACP10084.1
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) [Complete proteome] [HAMAP] EMBL ABQ20404.1
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ABQ20404.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5F6T3 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: A4D8BD4720B2C532

FASTA40445,219
        10         20         30         40         50         60 
MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA PDEILVDVIR 

        70         80         90        100        110        120 
NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI GNGASELIVM AMQALLNNGD 

       130        140        150        160        170        180 
EMLVPAPDYP LWTAAVALSG GKAVHYICDE EADWYPDLDD IRSKITPKTR GIVLINPNNP 

       190        200        210        220        230        240 
TGAVYSRDFL LEIIEIARKH KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK 

       250        260        270        280        290        300 
AYRVCGFRGG WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI 

       310        320        330        340        350        360 
LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK MVLDFLVQEK 

       370        380        390        400 
VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT TYSQ 

« Hide

References

[1]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395 EMBL ABQ20404.1.
[2]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395 EMBL ACP10084.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000627 Genomic DNA. Translation: ABQ20404.1.
CP001235 Genomic DNA. Translation: ACP10084.1.
RefSeqYP_001217504.1. NC_009457.1.
YP_002820320.1. NC_012582.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING345073.VC0395_A1563.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ20404; ABQ20404; VC0395_A1563.
ACP10084; ACP10084; VC395_2092.
GeneID5137464.
7775913.
KEGGvco:VC0395_A1563.
vcr:VC395_2092.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0436.
HOGENOMHOG000223042.
KOK14260.
OMARIVFLPH.
ProtClustDBPRK09265.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5F6T3_VIBC3
AccessionPrimary (citable) accession number: A5F6T3
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: April 16, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)