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A5F5T7 (A5F5T7_VIBC3) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.1.3.3 EMBL ABQ21280.1
Gene names
Name:serB EMBL ABQ21280.1
Ordered Locus Names:VC0395_A1924, VC395_2460
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length328 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABQ21280.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processL-serine biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionphosphoserine phosphatase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5F5T7 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 33624B8BEF750018

FASTA32836,146
        10         20         30         40         50         60 
MDMDALTTLP IKKHTTLLNR FPETRFVTQL AKKRASWIVF GHYLTPAQFE DMDFFTNRFN 

        70         80         90        100        110        120 
AILDMWKVGR YEVALMDGEL TSEHETILKA LELDYARIQD VPDLTKPGLI VLDMDSTAIQ 

       130        140        150        160        170        180 
IECIDEIAKL AGVGEEVAEV TERAMQGELD FEQSLRLRVS KLKDAPEQIL SQVRETLPLM 

       190        200        210        220        230        240 
PELPELVATL HAFGWKVAIA SGGFTYFSDY LKEQLSLDYA QSNTLEIVSG KLTGQVLGEV 

       250        260        270        280        290        300 
VSAQTKADIL LTLAQQYDVE IHNTVAVGDG ANDLVMMAAA GLGVAYHAKP KVEAKAQTAV 

       310        320 
RFAGLGGVVC ILSAALVAQQ KLSWKSKP 

« Hide

References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].
[2]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000627 Genomic DNA. Translation: ABQ21280.1.
CP001235 Genomic DNA. Translation: ACP10450.1.

3D structure databases

ProteinModelPortalA5F5T7.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5F5T7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus VC0395_A1924 in contig CP000627_GR.
Gene locus VC395_2460 in contig CP001235_GR.
KEGGvco:VC0395_A1924.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0560.
HOGENOMHBG645339.
OMADYQVVRL.
ProtClustDBPRK11133.

Enzyme and pathway databases

BioCycVCHO345073:VC0395_A1924-MONOMER.

Family and domain databases

InterProIPR005834. Dehalogen-like_hydro.
IPR023214. HAD-like_dom.
IPR006383. HAD-SF_hydro_IB_PSP-like.
IPR023190. Pser_Pase_dom_2.
IPR004469. SerB.
[Graphical view]
Gene3DG3DSA:3.40.50.1000. HAD-like_dom. 2 hits.
G3DSA:1.10.150.210. Pser_Pase_dom_2. 1 hit.
KOK01079.
PfamPF00702. Hydrolase. 1 hit.
[Graphical view]
SUPFAMSSF56784. HAD-like_dom. 1 hit.
TIGRFAMsTIGR01488. HAD-SF-IB. 1 hit.
TIGR00338. SerB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5F5T7_VIBC3
AccessionPrimary (citable) accession number: A5F5T7
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 16, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)