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A5F4Z8

- A5F4Z8_VIBC3

UniProt

A5F4Z8 - A5F4Z8_VIBC3

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei149 – 1491UniRule annotation
Active sitei554 – 5541UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:VC0395_A2222Imported, VC395_2759Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)Imported
Taxonomic identifieri345073 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000249: Chromosome 2, UP000001630: Chromosome I

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi345073.VC0395_A2222.

Structurei

3D structure databases

ProteinModelPortaliA5F4Z8.
SMRiA5F4Z8. Positions 15-887.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238648.
KOiK01595.
OMAiELSTISC.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5F4Z8-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDVIFFQGRM TMNEKYAALK SNVSMLGRLL GQTIQAADGD VILAKVETIR
60 70 80 90 100
KLSKSARAGN QADRELLIEE IKNLPNHQLT PVARAFNQFL NLTNIAEQYH
110 120 130 140 150
TISRHCESHV NELDAIGSLF AKLAQKSVSK FDTAQAIRDL NIELVLTAHP
160 170 180 190 200
TEITRRTMIN KLVKINECLS KLELSDLSPK ERHKTERRLE QLIAQSWHSD
210 220 230 240 250
VIRQQRPTPL DEAKWGFAVV ENSLWHAVPE FLRELDEQVK SYLGEGLPID
260 270 280 290 300
ARPVHFSSWM GGDRDGNPFV THTITREVLL LSRWKAADLY LTDINELVSE
310 320 330 340 350
LSMTKCNEAV RALAGEEHEP YRAILKPIRS LLQETIEILD AKLNGQKLAV
360 370 380 390 400
KAPLQTADQL WEPLYACYQS LHECGMGVIA DGSLLDTLRR IKAFGVHLVR
410 420 430 440 450
LDVRQESSRH AEVISELTRH LGIGDYNQWS EQDKIAFLTT ELNSKRPLLP
460 470 480 490 500
RDWQPSPQVK EVLDTCKIIA AQSKDAFGAY VISMARTASD VLAVHLLLQE
510 520 530 540 550
AGCPYRMDVC PLFETLDDLN NAESVIRQLM NIDLYRGFIQ NHQMVMIGYS
560 570 580 590 600
DSAKDAGVMA AGWAQYRAME ALVKVGEEAG IELTLFHGRG GTIGRGGAPA
610 620 630 640 650
HAALLSQPPK SLKGGLRVTE QGEMIRFKLG LPEVAVNSFN MYASAILEAN
660 670 680 690 700
LLPPPEPKNE WRALMDILSE ISCNAYRKVV RGEPDFVPYF RQATPELELG
710 720 730 740 750
KLPLGSRPAK RNPTGGVESL RAIPWIFSWS QNRLILPAWL GAGEAIQIAI
760 770 780 790 800
NEGHQALLEE MCREWPFFST RLGMLEMVYT KCSVSIARHY DERLVEPTLR
810 820 830 840 850
PLGEKLRAQL QQDIKVVLNV ENNENLMQSD PWGQESIRLR NIYIEPLNML
860 870 880
QAELLYRTRQ SELPAPELEE ALMVTIAGIA AGMRNTG
Length:887
Mass (Da):99,697
Last modified:June 12, 2007 - v1
Checksum:i6DB1273ABB94325B
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ21288.1.
CP001235 Genomic DNA. Translation: ACP10744.1.
RefSeqiYP_001218138.1. NC_009457.1.
YP_002820980.1. NC_012582.1.

Genome annotation databases

EnsemblBacteriaiABQ21288; ABQ21288; VC0395_A2222.
ACP10744; ACP10744; VC395_2759.
GeneIDi5136025.
7776484.
KEGGivco:VC0395_A2222.
vcr:VC395_2759.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ21288.1 .
CP001235 Genomic DNA. Translation: ACP10744.1 .
RefSeqi YP_001218138.1. NC_009457.1.
YP_002820980.1. NC_012582.1.

3D structure databases

ProteinModelPortali A5F4Z8.
SMRi A5F4Z8. Positions 15-887.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 345073.VC0395_A2222.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ21288 ; ABQ21288 ; VC0395_A2222 .
ACP10744 ; ACP10744 ; VC395_2759 .
GeneIDi 5136025.
7776484.
KEGGi vco:VC0395_A2222.
vcr:VC395_2759.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238648.
KOi K01595.
OMAi ELSTISC.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Heidelberg J.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395Imported and O395Imported.
  2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.

Entry informationi

Entry nameiA5F4Z8_VIBC3
AccessioniPrimary (citable) accession number: A5F4Z8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: October 29, 2014
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3