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A5F4Z8

- A5F4Z8_VIBC3

UniProt

A5F4Z8 - A5F4Z8_VIBC3

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 56 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei149 – 1491UniRule annotation
    Active sitei554 – 5541UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotationImported
    Ordered Locus Names:VC0395_A2222Imported, VC395_2759Imported
    OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)Imported
    Taxonomic identifieri345073 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000000249: Chromosome 2, UP000001630: Chromosome I

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Protein-protein interaction databases

    STRINGi345073.VC0395_A2222.

    Structurei

    3D structure databases

    ProteinModelPortaliA5F4Z8.
    SMRiA5F4Z8. Positions 15-887.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2352.
    HOGENOMiHOG000238648.
    KOiK01595.
    OMAiELSTISC.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5F4Z8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDVIFFQGRM TMNEKYAALK SNVSMLGRLL GQTIQAADGD VILAKVETIR    50
    KLSKSARAGN QADRELLIEE IKNLPNHQLT PVARAFNQFL NLTNIAEQYH 100
    TISRHCESHV NELDAIGSLF AKLAQKSVSK FDTAQAIRDL NIELVLTAHP 150
    TEITRRTMIN KLVKINECLS KLELSDLSPK ERHKTERRLE QLIAQSWHSD 200
    VIRQQRPTPL DEAKWGFAVV ENSLWHAVPE FLRELDEQVK SYLGEGLPID 250
    ARPVHFSSWM GGDRDGNPFV THTITREVLL LSRWKAADLY LTDINELVSE 300
    LSMTKCNEAV RALAGEEHEP YRAILKPIRS LLQETIEILD AKLNGQKLAV 350
    KAPLQTADQL WEPLYACYQS LHECGMGVIA DGSLLDTLRR IKAFGVHLVR 400
    LDVRQESSRH AEVISELTRH LGIGDYNQWS EQDKIAFLTT ELNSKRPLLP 450
    RDWQPSPQVK EVLDTCKIIA AQSKDAFGAY VISMARTASD VLAVHLLLQE 500
    AGCPYRMDVC PLFETLDDLN NAESVIRQLM NIDLYRGFIQ NHQMVMIGYS 550
    DSAKDAGVMA AGWAQYRAME ALVKVGEEAG IELTLFHGRG GTIGRGGAPA 600
    HAALLSQPPK SLKGGLRVTE QGEMIRFKLG LPEVAVNSFN MYASAILEAN 650
    LLPPPEPKNE WRALMDILSE ISCNAYRKVV RGEPDFVPYF RQATPELELG 700
    KLPLGSRPAK RNPTGGVESL RAIPWIFSWS QNRLILPAWL GAGEAIQIAI 750
    NEGHQALLEE MCREWPFFST RLGMLEMVYT KCSVSIARHY DERLVEPTLR 800
    PLGEKLRAQL QQDIKVVLNV ENNENLMQSD PWGQESIRLR NIYIEPLNML 850
    QAELLYRTRQ SELPAPELEE ALMVTIAGIA AGMRNTG 887
    Length:887
    Mass (Da):99,697
    Last modified:June 12, 2007 - v1
    Checksum:i6DB1273ABB94325B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000627 Genomic DNA. Translation: ABQ21288.1.
    CP001235 Genomic DNA. Translation: ACP10744.1.
    RefSeqiYP_001218138.1. NC_009457.1.
    YP_002820980.1. NC_012582.1.

    Genome annotation databases

    EnsemblBacteriaiABQ21288; ABQ21288; VC0395_A2222.
    ACP10744; ACP10744; VC395_2759.
    GeneIDi5136025.
    7776484.
    KEGGivco:VC0395_A2222.
    vcr:VC395_2759.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000627 Genomic DNA. Translation: ABQ21288.1 .
    CP001235 Genomic DNA. Translation: ACP10744.1 .
    RefSeqi YP_001218138.1. NC_009457.1.
    YP_002820980.1. NC_012582.1.

    3D structure databases

    ProteinModelPortali A5F4Z8.
    SMRi A5F4Z8. Positions 15-887.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 345073.VC0395_A2222.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABQ21288 ; ABQ21288 ; VC0395_A2222 .
    ACP10744 ; ACP10744 ; VC395_2759 .
    GeneIDi 5136025.
    7776484.
    KEGGi vco:VC0395_A2222.
    vcr:VC395_2759.

    Phylogenomic databases

    eggNOGi COG2352.
    HOGENOMi HOG000238648.
    KOi K01595.
    OMAi ELSTISC.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Heidelberg J.
      Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 39541 / Classical Ogawa 395 / O395Imported and O395Imported.
    2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
      Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
      PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.

    Entry informationi

    Entry nameiA5F4Z8_VIBC3
    AccessioniPrimary (citable) accession number: A5F4Z8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 56 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3