A5F4V1 (A5F4V1_VIBC3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL ABQ20584.1
Ordered Locus Names:	VC0395_A2266, VC395_2807

Organism

Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]

Taxonomic identifier

345073 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae

Protein attributes

Sequence length	222 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ABQ20584.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5F4V1 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 1EDEE1E601E39042	FASTA	222	25,349
	10 20 30 40 50 60 MLSALLIAKR YSSKEDTMPH LFPDLPYAYD ALEPYIDTKT MEVHYSKHHR TYYDKFLSAI 70 80 90 100 110 120 KGTEHEDRPL SEIFARVSTL PAAVRNHGGG YYNHIVYWNC MKPNAGGEPQ GELAAEIERQ 130 140 150 160 170 180 FGSFAQFKEA FSQAAVNTFG SGFVWLIVQQ GQLSITSTSN QDNPLMDVVA VRGEPILALD 190 200 210 220 VWEHAYYIRY QNRRPEYIDA WWNVVNWEAV SENYAIALTQ AA

References

[1]	Heidelberg J. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].
[2]	"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000627 Genomic DNA. Translation: ABQ20584.1. CP001235 Genomic DNA. Translation: ACP10792.1.
RefSeq	YP_001218182.1. NC_009457.1. YP_002821028.1. NC_012582.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	345073.VC0395_A2266.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABQ20584; ABQ20584; VC0395_A2266. ACP10792; ACP10792; VC395_2807.
GeneID	5137793. 7776526.
KEGG	vco:VC0395_A2266. vcr:VC395_2807.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0605.
HOGENOM	HOG000013584.
KO	K04564.
OMA	ETMTIHH.
ProtClustDB	CLSK874885.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5F4V1_VIBC3

Accession

Primary (citable) accession number: A5F4V1

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)