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A5F4J7 (A5F4J7_VIBC3) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein EMBL ABQ20523.1
Gene names
Ordered Locus Names:VC0395_A2383
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length408 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A5F4J7 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 583DEEE1570F1779

FASTA40847,568
        10         20         30         40         50         60 
MYTTYVARQP ILNAKRHTLG YELLFRDGEK NAFPEYMDAD RATYRLIVEN FLSLGTNPRI 

        70         80         90        100        110        120 
ARSRCFINFP HKSLIRRLPL TLPREQIVVE ILETCQPTDD LFEAVQELSQ RGYLLALDDF 

       130        140        150        160        170        180 
VYSPAWERFL PYVQIVKIDI MAMGLDKACE FVRGRLAQGS RRRFLAERVE TEDEFHQARH 

       190        200        210        220        230        240 
AGFTFFQGYF FSKPEIIKQR YVSPEHVIAM QLFREVCQPE VDYVRVERLV AQDIALSYKL 

       250        260        270        280        290        300 
LRFVNTMSDR ISVSISSFRQ ALVYLGQDKL RIFVSLAVAS YISSKKPKEL YNLSLQRAQF 

       310        320        330        340        350        360 
CQLMATHTHF KAHREQAFLI GMFSVLDALL DTSIEQLVEQ LPLADDVKLA LREREGPLGT 

       370        380        390        400 
LLDLEECFEK ADWQGVEQHC LELGFDLEDV RQELIEAQRW SQDINRLI

« Hide

References

[1]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000627 Genomic DNA. Translation: ABQ20523.1.

3D structure databases

ProteinModelPortalA5F4J7.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5F4J7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus VC0395_A2383 in contig CP000627_GR.
KEGGvco:VC0395_A2383.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3434.
HOGENOMHBG537479.
OMARQPIFNR.
ProtClustDBCLSK873876.

Enzyme and pathway databases

BioCycVCHO345073:VC0395_A2383-MONOMER.

Family and domain databases

InterProIPR014408. dGMP_Pdiesterase_EAL/HD-GYP.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR013976. HDOD.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
G3DSA:1.10.3150.10. HDOD. 1 hit.
KOK07181.
PfamPF00563. EAL. 1 hit.
PF08668. HDOD. 1 hit.
[Graphical view]
PIRSFPIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
PROSITEPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5F4J7_VIBC3
AccessionPrimary (citable) accession number: A5F4J7
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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