A5F3R5 (A5F3R5_VIBC3) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Thioredoxin PIRNR PIRNR000077

Gene names

Name:	trxA EMBL ABQ21778.1
Ordered Locus Names:	VC0395_A2698, VC395_0350

Organism

Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]

Taxonomic identifier

345073 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	108 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the thioredoxin family. PIRNR PIRNR000077 Contains 1 thioredoxin domain. RuleBase RU004207

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell redox homeostasis Inferred from electronic annotation. Source: InterPro glycerol ether metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	electron carrier activity Inferred from electronic annotation. Source: InterPro protein disulfide oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Amino acid modifications
	Disulfide bond	33 ↔ 36		Redox-active By similarity PIRSR PIRSR000077-4

Sequences

	Sequence		Length	Mass (Da)
	A5F3R5 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 6687EBE1CAA3F920	FASTA	108	11,645
	10 20 30 40 50 60 MSDKILQLTD DGFENDVIKA AGPVLVDFWA EWCGPCKMIA PILDEVADEY AGKLTIGKLN 70 80 90 100 IDHNAGTPPK FGIRGIPTLL LFKDGSVVAT KVGALSKTQL KEFLDANL

References

[1]	"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].
[2]	Heidelberg J. Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000627 Genomic DNA. Translation: ABQ21778.1. CP001235 Genomic DNA. Translation: ACP08375.1.
3D structure databases
ProteinModelPortal	A5F3R5.
SMR	A5F3R5. Positions 2-108.
ModBase	Search...
Protein-protein interaction databases
STRING	A5F3R5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GenomeReviews	Gene locus VC0395_A2698 in contig CP000627_GR. Gene locus VC395_0350 in contig CP001235_GR.
KEGG	vco:VC0395_A2698.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0526.
HOGENOM	HBG493509.
OMA	DEGFEND.
ProtClustDB	CLSK873930.
Enzyme and pathway databases
BioCyc	VCHO345073:VC0395_A2698-MONOMER.
Family and domain databases
InterPro	IPR005746. Thioredoxin. IPR012336. Thioredoxin-like_fold. IPR017937. Thioredoxin_CS. IPR013766. Thioredoxin_domain. [Graphical view]
Gene3D	G3DSA:3.40.30.10. Thioredoxin_fold. 1 hit.
KO	K03671.
PANTHER	PTHR10438. Trx. 1 hit.
Pfam	PF00085. Thioredoxin. 1 hit. [Graphical view]
PIRSF	PIRSF000077. Thioredoxin. 1 hit.
PRINTS	PR00421. THIOREDOXIN.
SUPFAM	SSF52833. Thiordxn-like_fd. 1 hit.
TIGRFAMs	TIGR01068. Thioredoxin. 1 hit.
PROSITE	PS00194. THIOREDOXIN_1. 1 hit. PS51352. THIOREDOXIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5F3R5_VIBC3

Accession

Primary (citable) accession number: A5F3R5

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	November 16, 2011
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)