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A5F2S9 (A5F2S9_VIBC3) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.5.1.25 EMBL ABQ20539.1
Gene names
Name:nagA-1 EMBL ABQ20539.1
Ordered Locus Names:VC0395_A0515, VC395_1009
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length378 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A5F2S9 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 34906344A3F92A0F

FASTA37840,956
        10         20         30         40         50         60 
MYALTNCKIY TGNDVLVKHA VIINGDKIEA VCPIESLPSE MNVVDLNGAN LSPGFIDLQL 

        70         80         90        100        110        120 
NGCGGVMFND EITAETIDTM HKANLKSGCT SFLPTLITSS DENMRQAIAA AREYQAKYPN 

       130        140        150        160        170        180 
QSLGLHLEGP YLNVMKKGIH SVDFIRPSDD TMIDTICANS DVIAKVTLAP ENNKPEHIEK 

       190        200        210        220        230        240 
LVKAGIVVSI GHTNATYSEA RKSFESGITF ATHLFNAMTP MVGREPGVVG AIYDTPEVYA 

       250        260        270        280        290        300 
GIIADGFHVD YANIRIAHKI KGEKLVLVTD ATAPAGAEMD YFIFVGKKVY YRDGKCVDEN 

       310        320        330        340        350        360 
GTLGGSALTM IEAVQNTVEH VGIALDEALR MATLYPAKAI GVDEKLGRIK KGMIANLTVF 

       370 
DRDFNVKATV VNGQYEQN 

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References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [Nankai/TEDA].
[2]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395 [TIGR].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000627 Genomic DNA. Translation: ABQ20539.1.
CP001235 Genomic DNA. Translation: ACP09021.1.

3D structure databases

ProteinModelPortalA5F2S9.
SMRA5F2S9. Positions 1-373.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5F2S9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus VC0395_A0515 in contig CP000627_GR.
Gene locus VC395_1009 in contig CP001235_GR.
KEGGvco:VC0395_A0515.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1820.
HOGENOMHBG464950.
OMATSSDEDM.
ProtClustDBPRK11170.

Enzyme and pathway databases

BioCycVCHO345073:VC0395_A0515-MONOMER.

Family and domain databases

InterProIPR006680. Amidohydro_1.
IPR003764. GlcNAc_6-P_deAcase.
IPR011059. Metal-dep_hydrolase_composite.
[Graphical view]
KOK01443.
PfamPF01979. Amidohydro_1. 1 hit.
[Graphical view]
SUPFAMSSF51338. Metalo_hydrolase. 1 hit.
TIGRFAMsTIGR00221. NagA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5F2S9_VIBC3
AccessionPrimary (citable) accession number: A5F2S9
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: November 16, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)