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A5F283

- A5F283_VIBC3

UniProt

A5F283 - A5F283_VIBC3

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Protein
Submitted name: Putative glutamate decarboxylase
Gene
VC0395_A0719, VC395_1216
Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative glutamate decarboxylaseImported
Gene namesi
Ordered Locus Names:VC0395_A0719Imported, VC395_1216Imported
OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)Imported
Taxonomic identifieri345073 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001630: Chromosome I, UP000000249: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi345073.VC0395_A0719.

Structurei

3D structure databases

ProteinModelPortaliA5F283.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiARYFRQP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A5F283-1 [UniParc]FASTAAdd to Basket

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MVSEHKSAQV NFDSLLKIFT VPEGPDSTLT KIDEELSRNL NHFLRKHIVA    50
EEKPLKEIEK DFSNAHIPEQ PQFVSDHTQY LLDTLVSHSV HTASPSFIGH 100
MTSALPYFLM PLSKIMIALN QNLVKIETSK AFTPLERQVL GMIHRLIYGE 150
TDHFYQQWMH SAEHSLGAFC SGGTIANITA LWVARNNALK AEGDFPGVEK 200
AGLFKAMRHY GHEGLAILVS ERGHYSLKKA ADVLGIGQEG LVAVKTDAHN 250
RICPHDLEQK ITELKANKIK VFAVVGVAGT TETGNIDPLR TIAQICQREQ 300
IHFHIDAAWG GATLMSNRYR GLLDGVELAD SVTIDAHKQL YIPMGAGMVL 350
FKDPNAMRSI EHHAQYILRQ GSKDLGSHTL EGSRSGMAML VYASMHIISR 400
PGYQLLIDQS IEKARYFADL IDAQTDFELV SQPELCLLTY RYLPEHVRMA 450
LEKSQGVQRA QLNELLNELT KFIQKKQRET GKSFVSRTQL NPHQWDKLAT 500
IVFRVVLANP LTTKEILHNV LDEQREIAQQ APKLMRQIEH LTQCILNQ 548
Length:548
Mass (Da):61,693
Last modified:June 12, 2007 - v1
Checksum:iDCBFD48556AF50B2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ20604.1.
CP001235 Genomic DNA. Translation: ACP09226.1.
RefSeqiYP_001216669.1. NC_009457.1.
YP_002819462.1. NC_012582.1.

Genome annotation databases

EnsemblBacteriaiABQ20604; ABQ20604; VC0395_A0719.
ACP09226; ACP09226; VC395_1216.
GeneIDi5137142.
7775164.
KEGGivco:VC0395_A0719.
vcr:VC395_1216.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000627 Genomic DNA. Translation: ABQ20604.1 .
CP001235 Genomic DNA. Translation: ACP09226.1 .
RefSeqi YP_001216669.1. NC_009457.1.
YP_002819462.1. NC_012582.1.

3D structure databases

ProteinModelPortali A5F283.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 345073.VC0395_A0719.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ20604 ; ABQ20604 ; VC0395_A0719 .
ACP09226 ; ACP09226 ; VC395_1216 .
GeneIDi 5137142.
7775164.
KEGGi vco:VC0395_A0719.
vcr:VC395_1216.

Phylogenomic databases

eggNOGi COG0076.
HOGENOMi HOG000282553.
KOi K01580.
OMAi ARYFRQP.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Heidelberg J.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.
  2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395 and O395Imported.

Entry informationi

Entry nameiA5F283_VIBC3
AccessioniPrimary (citable) accession number: A5F283
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: September 3, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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