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A5EZZ8 (SCRB_VIBC3) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable sucrose-6-phosphate hydrolase

Short name=Sucrase
EC=3.2.1.26
Alternative name(s):
Invertase
Gene names
Name:cscA
Ordered Locus Names:VC0395_0599, VC395_A0657
OrganismVibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) [Complete proteome] [HAMAP]
Taxonomic identifier345073 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Enables the bacterium to metabolize sucrose as a sole carbon source By similarity.

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.

Pathway

Glycan biosynthesis; sucrose metabolism.

Subcellular location

Cytoplasm By similarity.

Sequence similarities

Belongs to the glycosyl hydrolase 32 family.

Ontologies

Keywords
   Cellular componentCytoplasm
   Molecular functionGlycosidase
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionsucrose alpha-glucosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 546546Probable sucrose-6-phosphate hydrolase
PRO_0000341299

Regions

Region105 – 1084Substrate binding By similarity
Region167 – 1682Substrate binding By similarity
Region228 – 2292Substrate binding By similarity

Sites

Active site1081 By similarity
Binding site1241Substrate By similarity
Binding site2831Substrate By similarity

Sequences

Sequence LengthMass (Da)Tools
A5EZZ8 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: 8F7360DCCEC6B2CC

FASTA54662,312
        10         20         30         40         50         60 
MLLDTLLELA GGINNVTRIL APQGQVVLAL KHPPHAPHLP DDVSLQSVLG EWQLSVQRTA 

        70         80         90        100        110        120 
EVSDQQLAAI GKAIAERQKR ATLPYQTALD CPYRPQWHIS PPQGLLNDPN GFIYHQEEYH 

       130        140        150        160        170        180 
LFYQWHPFAC EHKDKYWVHL KSLDLVHWQW QSVALTPSDW FDSHGVFSGH AVSHQQDLWL 

       190        200        210        220        230        240 
FYTGNTRLGT ERQRQTMQCA ARMNANGEFE KLGPVIRCLP EGVTEHIRDP KVIYTQGKWQ 

       250        260        270        280        290        300 
MLLGAQTLAH QGRLAVYHSD DLLHWHFDKL YGDELGDYGY MWECPDWFEL QGEAFFVFGP 

       310        320        330        340        350        360 
QGIASANPHH TIEHQNRIFR ATQNAQGEIA LLQGWPLDEG FDFYAPQTAQ TADGRRVLCG 

       370        380        390        400        410        420 
WMGLPDETQH PSCDQGWIHQ LTALRELEWR EGKIYQHPLR ELDTLQSEPH TLLLSDTVTE 

       430        440        450        460        470        480 
LKTKSFDLQV TLPWGCELRL MQNAQYCVTL TLDAENRLLR LDRSATQIRQ GDTIRELKLD 

       490        500        510        520        530        540 
SPTVELRILA DQSSLEIFIN QGEHVMTSRI FTPLDATGIS LHGASVDAKL YYMAPASAPF 


NLEVNV 

« Hide

References

[1]Heidelberg J.
Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395.
[2]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 39541 / Ogawa 395 / O395.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000626 Genomic DNA. Translation: ABQ18842.1.
CP001236 Genomic DNA. Translation: ACP11491.1.

3D structure databases

ProteinModelPortalA5EZZ8.
ModBaseSearch...

Protein-protein interaction databases

STRINGA5EZZ8.

Protein family/group databases

CAZyGH32. Glycoside Hydrolase Family 32.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GenomeReviewsGene locus VC0395_0599 in contig CP000626_GR.
Gene locus VC395_A0657 in contig CP001236_GR.
KEGGvco:VC0395_0599.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1621.
HOGENOMHBG693902.
OMAHLFYQWF.
ProtClustDBCLSK788970.

Enzyme and pathway databases

BioCycVCHO345073:VC0395_0599-MONOMER.

Family and domain databases

InterProIPR008985. ConA-like_lec_gl.
IPR001362. Glyco_hydro_32.
IPR018053. Glyco_hydro_32_AS.
IPR013189. Glyco_hydro_32_C.
IPR013148. Glyco_hydro_32_N.
IPR023296. Glyco_hydro_43_beta-prop.
IPR006232. Suc6P_hydrolase.
[Graphical view]
Gene3DG3DSA:2.115.10.20. Glyco_hydro_43_beta-prop. 1 hit.
KOK01193.
PfamPF08244. Glyco_hydro_32C. 1 hit.
PF00251. Glyco_hydro_32N. 1 hit.
[Graphical view]
SMARTSM00640. Glyco_32. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF75005. Glyco_hydro_43_beta-prop. 1 hit.
TIGRFAMsTIGR01322. ScrB_fam. 1 hit.
PROSITEPS00609. GLYCOSYL_HYDROL_F32. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSCRB_VIBC3
AccessionPrimary (citable) accession number: A5EZZ8
Secondary accession number(s): C3M5S8
Entry history
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 12, 2007
Last modified: November 16, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families