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A5EZR7

- GLPB_VIBC3

UniProt

A5EZR7 - GLPB_VIBC3

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Protein
Anaerobic glycerol-3-phosphate dehydrogenase subunit B
Gene
glpB, VC0395_0687, VC395_A0565
Organism
Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor By similarity.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FMN By similarity.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. glycerol catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
Short name:
Anaerobic G-3-P dehydrogenase subunit B
Short name:
Anaerobic G3Pdhase B
Gene namesi
Name:glpB
Ordered Locus Names:VC0395_0687, VC395_A0565
OrganismiVibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Taxonomic identifieri345073 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000000249: Chromosome 1, UP000001630: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 436436Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation
PRO_1000072826Add
BLAST

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC By similarity.

Protein-protein interaction databases

STRINGi345073.VC0395_0687.

Structurei

3D structure databases

ProteinModelPortaliA5EZR7.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3075.
HOGENOMiHOG000278489.
KOiK00112.
OMAiFRSVNIS.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

A5EZR7-1 [UniParc]FASTAAdd to Basket

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MMHYDVAVIG GGIAGYSAAL RALQAGKKVV LINQGQSALH FSSGSIDVLG    50
RLPDGSVVNQ PFDALSALQQ QVPEHPYSKV GRKNSEKGLM WFKRTLDSAH 100
VPLHHEPDGA NHWRITPLGT LKNTWLSQPF VYPYRGNADF SRIVIVAIDG 150
YRDFQPAMLR DNLAQRPELA NTPMLTVNVS IPGFEGFRRN PNELRSIDIA 200
RLLRQESAWN ALCDQLMRVA RPDDLVIMPA IMGNGDGLHL MTKLQQVTQL 250
RFHEVPTMPP SLLGIRIEEA LHRSFIQGGG VQLKGDKVIG GDFAGSRLTA 300
IHTQNLRDFP ISAEHYVMAT GSYFSQGLQA SQHAIQEPTF ALDVQQNPDR 350
AQWRHAQFIA AQSHPFMTFG VITDANLHPS RQGKTIDNLW CCGAMLSGYD 400
PVFEGCGGGV AIATAYHAVE QILATYAQTK QPEVLL 436
Length:436
Mass (Da):48,030
Last modified:June 12, 2007 - v1
Checksum:i841AE0376A41D557
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000626 Genomic DNA. Translation: ABQ18464.1.
CP001236 Genomic DNA. Translation: ACP11399.1.
RefSeqiYP_001215526.1. NC_009456.1.
YP_002821635.1. NC_012583.1.

Genome annotation databases

EnsemblBacteriaiABQ18464; ABQ18464; VC0395_0687.
ACP11399; ACP11399; VC395_A0565.
GeneIDi5134955.
7777629.
KEGGivco:VC0395_0687.
vcr:VC395_A0565.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000626 Genomic DNA. Translation: ABQ18464.1 .
CP001236 Genomic DNA. Translation: ACP11399.1 .
RefSeqi YP_001215526.1. NC_009456.1.
YP_002821635.1. NC_012583.1.

3D structure databases

ProteinModelPortali A5EZR7.
ModBasei Search...

Protein-protein interaction databases

STRINGi 345073.VC0395_0687.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ18464 ; ABQ18464 ; VC0395_0687 .
ACP11399 ; ACP11399 ; VC395_A0565 .
GeneIDi 5134955.
7777629.
KEGGi vco:VC0395_0687.
vcr:VC395_A0565.

Phylogenomic databases

eggNOGi COG3075.
HOGENOMi HOG000278489.
KOi K00112.
OMAi FRSVNIS.

Enzyme and pathway databases

UniPathwayi UPA00618 ; UER00673 .

Family and domain databases

HAMAPi MF_00753. Glycerol3P_GlpB.
InterProi IPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
[Graphical view ]
PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Heidelberg J.
    Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395.
  2. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 39541 / Classical Ogawa 395 / O395.

Entry informationi

Entry nameiGLPB_VIBC3
AccessioniPrimary (citable) accession number: A5EZR7
Secondary accession number(s): C3M5I6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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