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A5EWU9

- PTH_DICNV

UniProt

A5EWU9 - PTH_DICNV

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Protein

Peptidyl-tRNA hydrolase

Gene

pth

Organism
Dichelobacter nodosus (strain VCS1703A)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis.UniRule annotation

Catalytic activityi

N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA.UniRule annotation

GO - Molecular functioni

  1. aminoacyl-tRNA hydrolase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciDNOD246195:GHHS-63-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Peptidyl-tRNA hydrolaseUniRule annotation (EC:3.1.1.29UniRule annotation)
Short name:
PTHUniRule annotation
Gene namesi
Name:pthUniRule annotation
Ordered Locus Names:DNO_0063
OrganismiDichelobacter nodosus (strain VCS1703A)
Taxonomic identifieri246195 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaCardiobacterialesCardiobacteriaceaeDichelobacter
ProteomesiUP000000248: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 189189Peptidyl-tRNA hydrolasePRO_1000071227Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi246195.DNO_0063.

Structurei

3D structure databases

ProteinModelPortaliA5EWU9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PTH family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0193.
HOGENOMiHOG000004796.
KOiK01056.
OMAiEIDINNH.
OrthoDBiEOG6C5RTR.

Family and domain databases

Gene3Di3.40.50.1470. 1 hit.
HAMAPiMF_00083. Pept_tRNA_hydro_bact.
InterProiIPR001328. Pept_tRNA_hydro.
IPR018171. Pept_tRNA_hydro_CS.
[Graphical view]
PANTHERiPTHR17224. PTHR17224. 1 hit.
PfamiPF01195. Pept_tRNA_hydro. 1 hit.
[Graphical view]
SUPFAMiSSF53178. SSF53178. 1 hit.
TIGRFAMsiTIGR00447. pth. 1 hit.
PROSITEiPS01195. PEPT_TRNA_HYDROL_1. 1 hit.
PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5EWU9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLKLIVGLGN PGEQYQKTRH NAGFWLLDQT AQDYSCRLRT EKKFFAEFGE
60 70 80 90 100
IAINQQKIFL LKPQTFMNAS GKSLAAVCRF YHIEPQQILI IHDELDLPEG
110 120 130 140 150
KIKLKKSGGH GGHNGLRDII AALASQDFYR LRIGIGRPEN STQVIDYVLK
160 170 180
APSATHMERL NESLSYGKKA IEKLITEGDE KAMHWLHSL
Length:189
Mass (Da):21,405
Last modified:June 12, 2007 - v1
Checksum:iB1B573F3D77BE8FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000513 Genomic DNA. Translation: ABQ13985.1.
RefSeqiWP_011927816.1. NC_009446.1.
YP_001208995.1. NC_009446.1.

Genome annotation databases

EnsemblBacteriaiABQ13985; ABQ13985; DNO_0063.
GeneIDi5122736.
KEGGidno:DNO_0063.
PATRICi21784412. VBIDicNod48475_0059.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000513 Genomic DNA. Translation: ABQ13985.1 .
RefSeqi WP_011927816.1. NC_009446.1.
YP_001208995.1. NC_009446.1.

3D structure databases

ProteinModelPortali A5EWU9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 246195.DNO_0063.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABQ13985 ; ABQ13985 ; DNO_0063 .
GeneIDi 5122736.
KEGGi dno:DNO_0063.
PATRICi 21784412. VBIDicNod48475_0059.

Phylogenomic databases

eggNOGi COG0193.
HOGENOMi HOG000004796.
KOi K01056.
OMAi EIDINNH.
OrthoDBi EOG6C5RTR.

Enzyme and pathway databases

BioCyci DNOD246195:GHHS-63-MONOMER.

Family and domain databases

Gene3Di 3.40.50.1470. 1 hit.
HAMAPi MF_00083. Pept_tRNA_hydro_bact.
InterProi IPR001328. Pept_tRNA_hydro.
IPR018171. Pept_tRNA_hydro_CS.
[Graphical view ]
PANTHERi PTHR17224. PTHR17224. 1 hit.
Pfami PF01195. Pept_tRNA_hydro. 1 hit.
[Graphical view ]
SUPFAMi SSF53178. SSF53178. 1 hit.
TIGRFAMsi TIGR00447. pth. 1 hit.
PROSITEi PS01195. PEPT_TRNA_HYDROL_1. 1 hit.
PS01196. PEPT_TRNA_HYDROL_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: VCS1703A.

Entry informationi

Entry nameiPTH_DICNV
AccessioniPrimary (citable) accession number: A5EWU9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: June 12, 2007
Last modified: November 26, 2014
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3