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A5EVC6 (A5EVC6_DICNV) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.1.17 EMBL ABQ13373.1
Gene names
Name:sdaA EMBL ABQ13373.1
Ordered Locus Names:DNO_0619 EMBL ABQ13373.1
OrganismDichelobacter nodosus (strain VCS1703A) [Complete proteome] [HAMAP] EMBL ABQ13373.1
Taxonomic identifier246195 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaCardiobacterialesCardiobacteriaceaeDichelobacter

Protein attributes

Sequence length456 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL ABQ13373.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processgluconeogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular_function4 iron, 4 sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

L-serine ammonia-lyase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A5EVC6 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: D04796FF02DDEC5D

FASTA45649,130
        10         20         30         40         50         60 
MISIKSILKI GIGPSSSHTM GPMRAAAVFR THLIEKGLLD KTTRVVVNLY GSLSATGKGH 

        70         80         90        100        110        120 
ATDSATIAGL TGDDPQTVDT DSLPERIERI KKEGKLPLSD THQIAFNYDR DIIFEKTALP 

       130        140        150        160        170        180 
QHENGMTLKA FNNDQVLYEE TVFSIGGGFI ASAEELAHQG KQTREMNVPY PFQKAKDVVA 

       190        200        210        220        230        240 
LCQQHKLRFS DLILANEVAL LGSEEAVNEY CQRVWAVMNH CIEGGLSKEG FLPGGLKLPR 

       250        260        270        280        290        300 
RAAKMHAQLQ AAEKEGAADP MRVVDWVNMF AIAVNEENAA GARVVTAPTN GACGVVPAVL 

       310        320        330        340        350        360 
AYYNRFIKPI DEETIMRYLL TCSGIGVLYK LNASISGAEV GCQGEVGTAC SMAAGGLAEI 

       370        380        390        400        410        420 
QGATVEQVCA AAEMAMEHNL GLTCDPIAGL VQVPCIERNG VAAMKSINAA RMALMRTDNT 

       430        440        450 
FVSLDDVIQT MLETGRDMHS KYRETSQGGL AVHVKY 

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References

[1]"Genome sequence and identification of candidate vaccine antigens from the animal pathogen Dichelobacter nodosus."
Myers G.S., Parker D., Al-Hasani K., Kennan R.M., Seemann T., Ren Q., Badger J.H., Selengut J.D., Deboy R.T., Tettelin H., Boyce J.D., McCarl V.P., Han X., Nelson W.C., Madupu R., Mohamoud Y., Holley T., Fedorova N. expand/collapse author list , Khouri H., Bottomley S.P., Whittington R.J., Adler B., Songer J.G., Rood J.I., Paulsen I.T.
Nat. Biotechnol. 25:569-575(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: VCS1703A EMBL ABQ13373.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000513 Genomic DNA. Translation: ABQ13373.1.
RefSeqYP_001209528.1. NC_009446.1.

3D structure databases

ProteinModelPortalA5EVC6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING246195.DNO_0619.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ13373; ABQ13373; DNO_0619.
GeneID5122235.
KEGGdno:DNO_0619.
PATRIC21785556. VBIDicNod48475_0621.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1760.
HOGENOMHOG000036732.
KOK01752.
OMAHCKQSGL.
OrthoDBEOG64V2GZ.

Enzyme and pathway databases

BioCycDNOD246195:GHHS-619-MONOMER.

Family and domain databases

Gene3D3.30.1330.90. 1 hit.
InterProIPR029009. ASB_dom.
IPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
PfamPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
SUPFAMSSF143548. SSF143548. 1 hit.
TIGRFAMsTIGR00720. sda_mono. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA5EVC6_DICNV
AccessionPrimary (citable) accession number: A5EVC6
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: June 11, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)