A5ERV4 (URED3_BRASB) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Urease accessory protein UreD 3

Gene names

Name:	ureD3
Ordered Locus Names:	BBta_7013

Organism

Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP]

Taxonomic identifier

288000 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	278 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter By similarity. HAMAP MF_01384
Subunit structure	UreD, UreF and UreG form a complex that acts as a GTP-hydrolysis-dependent molecular chaperone, activating the urease apoprotein by helping to assemble the nickel containing metallocenter of UreC. The UreE protein probably delivers the nickel By similarity.
Subcellular location	Cytoplasm By similarity HAMAP MF_01384.
Sequence similarities	Belongs to the UreD family.

Ontologies

Keywords
Biological process	Nickel insertion
Cellular component	Cytoplasm
Molecular function	Chaperone
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	nitrogen compound metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	nickel cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 278	278	Urease accessory protein UreD 3 HAMAP MF_01384		PRO_0000340415

Sequences

	Sequence		Length	Mass (Da)
	A5ERV4 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: D89DC06FB6091CFE	FASTA	278	29,636
	10 20 30 40 50 60 MRADPASAAA DIFEANRARG AVRFDVRLQD GMTRRHHLHE SGSLRVRFPS PEDDGLSAMF 70 80 90 100 110 120 VNTAGGIAGG DRFAVEVAAG EGSRVTLSSA AAEKVYRAPG KPAELDIALT AAAGAHIAWL 130 140 150 160 170 180 PQETILFDRA RIHRRIDIDL AATASLLLCE IVVFGRTAMG ERMREGEFVD RWRLRRGGRL 190 200 210 220 230 240 VFAETVRLDG DIGGKLAHPA IANGAAAIGT ALIVPGDAAL VERIRESLPA FRGEAGLSAW 250 260 270 NGFAMARFCA QDAASLRADM MAVLGCASAV PLPRLWLN

References

[1]

"Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia." Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.-C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z. , Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.-S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M. Science 316:1307-1312(2007) [PubMed: 17540897] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BTAi1 / ATCC BAA-1182.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000494 Genomic DNA. Translation: ABQ38898.1.
RefSeq	YP_001242804.1. NC_009485.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	A5ERV4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5150963.
GenomeReviews	Gene locus BBta_7013 in contig CP000494_GR.
KEGG	bbt:BBta_7013.
PATRIC	21214681. VBIBraSp29847_6990.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0829.
HOGENOM	HBG711156.
OMA	QETILFD.
ProtClustDB	CLSK818584.
Family and domain databases
HAMAP	MF_01384. UreD. [Tree]
InterPro	IPR002669. UreD. [Graphical view]
KO	K03190.
Pfam	PF01774. UreD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

URED3_BRASB

Accession

Primary (citable) accession number: A5ERV4

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 10, 2008
Last sequence update:	June 12, 2007
Last modified:	December 14, 2011
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program