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Protein
Submitted name:

Deoxyribodipyrimidine photo-lyase type I

Gene

BBta_4932

Organism
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. deoxyribodipyrimidine photo-lyase activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA repair Source: InterPro
  2. protein-chromophore linkage Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Keywords - Ligandi

ChromophoreUniRule annotation, FADUniRule annotation, Flavoprotein

Enzyme and pathway databases

BioCyciBSP288000:GJBR-4722-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Deoxyribodipyrimidine photo-lyase type IImported (EC:4.1.99.3Imported)
Gene namesi
Ordered Locus Names:BBta_4932Imported
OrganismiBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)Imported
Taxonomic identifieri288000 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000000246 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi288000.BBta_4932.

Family & Domainsi

Sequence similaritiesi

Belongs to the DNA photolyase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0415.
HOGENOMiHOG000245621.
KOiK01669.
OMAiLWQTGYM.
OrthoDBiEOG6XWV2B.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR002081. Cryptochrome/DNA_photolyase_1.
IPR018394. DNA_photolyase_1_CS_C.
IPR006050. DNA_photolyase_N.
IPR005101. Photolyase_FAD-bd/Cryptochr_C.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF00875. DNA_photolyase. 1 hit.
PF03441. FAD_binding_7. 1 hit.
[Graphical view]
PRINTSiPR00147. DNAPHOTLYASE.
SUPFAMiSSF48173. SSF48173. 1 hit.
SSF52425. SSF52425. 1 hit.
PROSITEiPS00394. DNA_PHOTOLYASES_1_1. 1 hit.
PS51645. PHR_CRY_ALPHA_BETA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5ELA6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFSPIVVWF RESLRLSDHP ALHAAATSGA PVICCYVYDT ESAALRPLGG
60 70 80 90 100
ASRWWLAQSL RALQDELDAL GVKLVIRRGP SAKAISELAR EASTSAVYWN
110 120 130 140 150
DVAQTGPRAV AAEVEAALDA IGVKSRVFAD DLLIDPAELR GKDGRGPRVF
160 170 180 190 200
TPFWKRVLAL GDPPKPLPVP VRLSSPSGVA SLTVDKLALE PTSPDWAGGL
210 220 230 240 250
RTTWRAGERA AQARLAKFLE TTVRGYAADR DRPDIEATSR LSPHLRFGEI
260 270 280 290 300
SPRQIWHAAR FAAEQQPAFA RGIDKFLSEL GWREFSRHLL FNNPDLATRN
310 320 330 340 350
LQPSFDAFPW SQDAAALRAW QRGQTGYPIV DAGMRELWHT GSMHNRVRMV
360 370 380 390 400
AASLLVKHLL IDWRLGEQWF WDTLVDADPG SNPASWQWVA GSGADAAPYF
410 420 430 440 450
RVFNPVLQGE KFDSSGTYVR RWVPELARLP AALIHQPWAA KPLELAEAGV
460 470 480
VLGRSYPAPV VDHRHGRERA LAAYASLRTS D
Length:481
Mass (Da):53,089
Last modified:June 12, 2007 - v1
Checksum:iB8403E1450C5A242
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000494 Genomic DNA. Translation: ABQ36950.1.
RefSeqiWP_012044933.1. NC_009485.1.
YP_001240856.1. NC_009485.1.

Genome annotation databases

EnsemblBacteriaiABQ36950; ABQ36950; BBta_4932.
KEGGibbt:BBta_4932.
PATRICi21210615. VBIBraSp29847_4969.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000494 Genomic DNA. Translation: ABQ36950.1.
RefSeqiWP_012044933.1. NC_009485.1.
YP_001240856.1. NC_009485.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi288000.BBta_4932.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ36950; ABQ36950; BBta_4932.
KEGGibbt:BBta_4932.
PATRICi21210615. VBIBraSp29847_4969.

Phylogenomic databases

eggNOGiCOG0415.
HOGENOMiHOG000245621.
KOiK01669.
OMAiLWQTGYM.
OrthoDBiEOG6XWV2B.

Enzyme and pathway databases

BioCyciBSP288000:GJBR-4722-MONOMER.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiIPR002081. Cryptochrome/DNA_photolyase_1.
IPR018394. DNA_photolyase_1_CS_C.
IPR006050. DNA_photolyase_N.
IPR005101. Photolyase_FAD-bd/Cryptochr_C.
IPR014729. Rossmann-like_a/b/a_fold.
[Graphical view]
PfamiPF00875. DNA_photolyase. 1 hit.
PF03441. FAD_binding_7. 1 hit.
[Graphical view]
PRINTSiPR00147. DNAPHOTLYASE.
SUPFAMiSSF48173. SSF48173. 1 hit.
SSF52425. SSF52425. 1 hit.
PROSITEiPS00394. DNA_PHOTOLYASES_1_1. 1 hit.
PS51645. PHR_CRY_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BTAi1 / ATCC BAA-1182Imported.

Entry informationi

Entry nameiA5ELA6_BRASB
AccessioniPrimary (citable) accession number: A5ELA6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: April 29, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.