A5EKM8 (A5EKM8_BRASB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Dihydrodipicolinate synthase EMBL ABQ36722.1
EC=4.2.1.52 EMBL ABQ36722.1

Gene names

Name:	dapA EMBL ABQ36722.1
Ordered Locus Names:	BBta_4694

Organism

Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP] EMBL ABQ36722.1

Taxonomic identifier

288000 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	296 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ABQ36722.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	diaminopimelate biosynthetic process Inferred from electronic annotation. Source: HAMAP
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	dihydrodipicolinate synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5EKM8 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 26CC3CEC2C65F5F3	FASTA	296	31,976
	10 20 30 40 50 60 MAAKTNFRGS FTALVTPFKN GAVDEAAFRS LVNWQIDEGT NGLVPVGTTG ESPTLSHDEH 70 80 90 100 110 120 KQVVEWCIAE AKGRVPVIAG AGSNSTREAV ELAEHAEKAG ADAVLVVTPY YNKPTQEGLY 130 140 150 160 170 180 QHFKAINDAI GIPIIIYNIP PRSVIDMSVD TMKRLFELKN IAGVKDATAS MVRVSQQRAT 190 200 210 220 230 240 LGEDFNQLSG EDATIIGYMA HGGHGCISVT SNVAPRLCAE FHAAWQKGDV ATALKIHDKL 250 260 270 280 290 MPLHTNLFIE SNPGPVKYAL SLLGKLEERL RLPMVPVSEP TRIAVREAMV HAGLIN

References

[1]

"Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia." Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.-C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z. , Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.-S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M. Science 316:1307-1312(2007) [PubMed: 17540897] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000494 Genomic DNA. Translation: ABQ36722.1.
RefSeq	YP_001240628.1. NC_009485.1.
3D structure databases
ProteinModelPortal	A5EKM8.
SMR	A5EKM8. Positions 7-292.
ModBase	Search...
Protein-protein interaction databases
STRING	A5EKM8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5152681.
GenomeReviews	Gene locus BBta_4694 in contig CP000494_GR.
KEGG	bbt:BBta_4694.
PATRIC	21210145. VBIBraSp29847_4736.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0329.
HOGENOM	HBG358848.
OMA	HFKAVHD.
ProtClustDB	PRK03170.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR002220. Dihydrodipicolinate_synth-like. IPR020625. Dihydrodipicolinate_synth_AS. IPR020624. Dihydrodipicolinate_synth_CS. IPR005263. Dihydrodipicolinate_synth_DapA. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01714.
PANTHER	PTHR12128. DHDPS. 1 hit.
Pfam	PF00701. DHDPS. 1 hit. [Graphical view]
PIRSF	PIRSF001365. DHDPS. 1 hit.
PRINTS	PR00146. DHPICSNTHASE.
TIGRFAMs	TIGR00674. DapA. 1 hit.
PROSITE	PS00665. DHDPS_1. 1 hit. PS00666. DHDPS_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5EKM8_BRASB

Accession

Primary (citable) accession number: A5EKM8

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	January 25, 2012
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)