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Protein

N utilization substance protein B homolog

Gene

nusB

Organism
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in the transcription termination process.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation, Transcription termination

Enzyme and pathway databases

BioCyciBSP288000:GJBR-4440-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
N utilization substance protein B homologUniRule annotation
Short name:
Protein NusBUniRule annotation
Gene namesi
Name:nusBUniRule annotation
Ordered Locus Names:BBta_4644
OrganismiBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Taxonomic identifieri288000 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
Proteomesi
  • UP000000246 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 169169N utilization substance protein B homologPRO_1000057493Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi288000.BBta_4644.

Structurei

3D structure databases

ProteinModelPortaliA5EKH8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the NusB family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107XZX. Bacteria.
COG0781. LUCA.
HOGENOMiHOG000281869.
KOiK03625.
OMAiEYVDVAH.
OrthoDBiPOG091H04JC.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
HAMAPiMF_00073. NusB. 1 hit.
InterProiIPR011605. NusB_fam.
IPR006027. NusB_RsmB_TIM44.
[Graphical view]
PANTHERiPTHR11078. PTHR11078. 1 hit.
PfamiPF01029. NusB. 1 hit.
[Graphical view]
SUPFAMiSSF48013. SSF48013. 1 hit.
TIGRFAMsiTIGR01951. nusB. 1 hit.

Sequencei

Sequence statusi: Complete.

A5EKH8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAESSNKPFR GPVRANDRKA NRRGAARLAA VQALYQMDIA GAGINDVLAE
60 70 80 90 100
FESHWLGSEV EGEQYLPAEA AFFRDIVSGV VRDQTKIDPV LDTALERGWP
110 120 130 140 150
LQRIEAILRA VLRAGAYELE RRKDVPAKVV VSEYVDIAHA FVERDETGMV
160
NAVLEQLARQ YRADEMGPK
Length:169
Mass (Da):18,823
Last modified:June 12, 2007 - v1
Checksum:i84D7F2828AE7FB34
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000494 Genomic DNA. Translation: ABQ36672.1.
RefSeqiWP_012044662.1. NC_009485.1.

Genome annotation databases

EnsemblBacteriaiABQ36672; ABQ36672; BBta_4644.
KEGGibbt:BBta_4644.
PATRICi21210047. VBIBraSp29847_4687.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000494 Genomic DNA. Translation: ABQ36672.1.
RefSeqiWP_012044662.1. NC_009485.1.

3D structure databases

ProteinModelPortaliA5EKH8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi288000.BBta_4644.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ36672; ABQ36672; BBta_4644.
KEGGibbt:BBta_4644.
PATRICi21210047. VBIBraSp29847_4687.

Phylogenomic databases

eggNOGiENOG4107XZX. Bacteria.
COG0781. LUCA.
HOGENOMiHOG000281869.
KOiK03625.
OMAiEYVDVAH.
OrthoDBiPOG091H04JC.

Enzyme and pathway databases

BioCyciBSP288000:GJBR-4440-MONOMER.

Family and domain databases

Gene3Di1.10.940.10. 1 hit.
HAMAPiMF_00073. NusB. 1 hit.
InterProiIPR011605. NusB_fam.
IPR006027. NusB_RsmB_TIM44.
[Graphical view]
PANTHERiPTHR11078. PTHR11078. 1 hit.
PfamiPF01029. NusB. 1 hit.
[Graphical view]
SUPFAMiSSF48013. SSF48013. 1 hit.
TIGRFAMsiTIGR01951. nusB. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiNUSB_BRASB
AccessioniPrimary (citable) accession number: A5EKH8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 5, 2008
Last sequence update: June 12, 2007
Last modified: September 7, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.