A5EIQ5 (A5EIQ5_BRASB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA topoisomerase IV subunit B EMBL ABQ36049.1
EC=5.99.1.3 EMBL ABQ36049.1

Gene names

Name:	parE EMBL ABQ36049.1
Ordered Locus Names:	BBta_3980

Organism

Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP] EMBL ABQ36049.1

Taxonomic identifier

288000 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	687 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ABQ36049.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	DNA topological change Inferred from electronic annotation. Source: InterPro
Cellular component	chromosome Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW DNA topoisomerase (ATP-hydrolyzing) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5EIQ5 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: C7D691F1A268B4AA	FASTA	687	75,092
	10 20 30 40 50 60 MGKPLKSAAK AKAKGVVDPL AALAAKGKAQ AKPAARAAGS EGEYTARDIE VLEGLEPVRR 70 80 90 100 110 120 RPGMYIGGTD EKALHHLFAE VIDNSMDEAL AGHATFIEVE LDAQGFLTVT DNGRGIPVDP 130 140 150 160 170 180 HPKFPKKSAL EIIMCTLHAG GKFDSKVYET SGGLHGVGIS VVNALSTRLE VEVARNQKLY 190 200 210 220 230 240 RMIFERGHPK GKLEEIGKVA NRRGTKVRFQ PDPTIFGAKA TFKPQRLFKM ARSKAYLFGG 250 260 270 280 290 300 VEIRWKCDPS LLKGIEDVQP EATFHFPGGL KDYLAAAIHA DTLVHPDIFA GKSGRTGGHG 310 320 330 340 350 360 GCEWAVAWTA DADGFLSSYC NTIPTPDGGT HESGIRSALL RGLKDHAERV GQGKRSANIT 370 380 390 400 410 420 SEDIMAGAAI MLSVFVREPE FQGQTKDRLA TAEAQRIVEQ AVKDPFDHWL SGNPVQANRL 430 440 450 460 470 480 LDFVIERAEE RIRRRQEKET ARKTATKKLR LPGKLADCTD AGTEGSELFI VEGDSAGGSA 490 500 510 520 530 540 KQARDRKKQA VLPLRGKILN VASAGKDKLT ANAQLADLVM AIGAGTGTSY REEDLRYQRI 550 560 570 580 590 600 IIMTDADVDG AHIASLLITF FYRQMPRLID EGHLYLAVPP LYRLTHNSKT FYARDEAHRD 610 620 630 640 650 660 EILKREFNAN AKVDIGRFKG LGEMMPAQLK ETTMDPAKRT LLRVVLLADD RDGTADSVER 670 680 LMGTKAEARF AFISEKAEFA SDELLDV

References

[1]

"Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia." Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.-C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z. , Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.-S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M. Science 316:1307-1312(2007) [PubMed: 17540897] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000494 Genomic DNA. Translation: ABQ36049.1.
RefSeq	YP_001239955.1. NC_009485.1.
3D structure databases
ProteinModelPortal	A5EIQ5.
ModBase	Search...
Protein-protein interaction databases
STRING	A5EIQ5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5151688.
GenomeReviews	Gene locus BBta_3980 in contig CP000494_GR.
KEGG	bbt:BBta_3980.
PATRIC	21208745. VBIBraSp29847_4044.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0187.
HOGENOM	HBG304889.
OMA	QARDKEF.
ProtClustDB	PRK05559.
Family and domain databases
InterPro	IPR003594. ATPase-like_ATP-bd. IPR020568. Ribosomal_S5_D2-typ_fold. IPR014721. Ribosomal_S5_D2-typ_fold_subgr. IPR001241. Topo_IIA. IPR013759. Topo_IIA_B/N_ab. IPR002288. Topo_IIA_B_C. IPR013506. Topo_IIA_bsu_dom2. IPR013760. Topo_IIA_cen. IPR018522. TopoIIA_CS. IPR005737. TopoIV_B_Gneg. IPR006171. Toprim_domain. [Graphical view]
Gene3D	G3DSA:3.30.565.10. ATP_bd_ATPase. 1 hit. G3DSA:3.30.230.10. Ribosomal_S5_D2-type_fold. 1 hit. G3DSA:3.40.50.670. Topo_IIA_B/N_ab. 1 hit.
KO	K02622.
Pfam	PF00204. DNA_gyraseB. 1 hit. PF00986. DNA_gyraseB_C. 1 hit. PF02518. HATPase_c. 1 hit. PF01751. Toprim. 1 hit. [Graphical view]
PRINTS	PR00418. TPI2FAMILY.
SMART	SM00387. HATPase_c. 1 hit. SM00433. TOP2c. 1 hit. [Graphical view]
SUPFAM	SSF55874. ATP_bd_ATPase. 1 hit. SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit. SSF56719. Topo_IIA_cen. 1 hit.
TIGRFAMs	TIGR01055. ParE_Gneg. 1 hit.
PROSITE	PS00177. TOPOISOMERASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5EIQ5_BRASB

Accession

Primary (citable) accession number: A5EIQ5

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	January 25, 2012
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)