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A5EG87 (TYPH_BRASB) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 43. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Putative thymidine phosphorylase

EC=2.4.2.4
Alternative name(s):
TdRPase
Gene names
Ordered Locus Names:BBta_3062
OrganismBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP]
Taxonomic identifier288000 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Thymidine + phosphate = thymine + 2-deoxy-alpha-D-ribose 1-phosphate. HAMAP-Rule MF_00703

Sequence similarities

Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.

Sequence caution

The sequence ABQ35181.1 differs from that shown. Reason: Erroneous initiation.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 511511Putative thymidine phosphorylase HAMAP-Rule MF_00703
PRO_0000314697

Sequences

Sequence LengthMass (Da)Tools
A5EG87 [UniParc].

Last modified January 15, 2008. Version 2.
Checksum: 02CE1A5A2442C6FD

FASTA51154,383
        10         20         30         40         50         60 
MSTIDSARPQ LKIRSVALDT GRENVVVISR RSRALRPEVF SGFSRVELRC NSRTLLATLL 

        70         80         90        100        110        120 
ITDDDALVGP DEIGLSQPAL RRFAEPAGTF ATVSPATPPD SLEAVRAKIR GETLSDQAIS 

       130        140        150        160        170        180 
AVIDDLAHYR YSDMEIAAFL IGSASFMTSG ELLALTRAMA NAGTQLKWPE PVVVDKHCIG 

       190        200        210        220        230        240 
GIPGNRTSMV VVPIVAAHGL TIPKTSSRAI TSPAGTADTM EVLARVNVGA EEMKSIVAAC 

       250        260        270        280        290        300 
NGCVIWGGHV NLSPADDILI SVERPLSLDT REQMVASILS KKLAAGSTHL LLDLPVGPTA 

       310        320        330        340        350        360 
KLSSGAEAMR LRKLFEFVGD RFGLNVEVIT TDGRQPIGNG IGPVLEARDV MAVLGNEPGA 

       370        380        390        400        410        420 
PADLREKSLR LAAHLLEYDP KLRGGAGYQR ARELLDSGAA LKQMQKIIDA QGPTTSRNEL 

       430        440        450        460        470        480 
GDLAFDVKAG RDGIVSAIDC LRLNRLARTA GAPINKGAGI RLFKKIGDRV DQGEPLYRVF 

       490        500        510 
TCDPSEHDLA VAAAAADHGY GFADEPNGHQ R 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000494 Genomic DNA. Translation: ABQ35181.1. Different initiation.
RefSeqYP_001239087.1. NC_009485.1.

3D structure databases

ProteinModelPortalA5EG87.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING288000.BBta_3062.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABQ35181; ABQ35181; BBta_3062.
GeneID5149443.
KEGGbbt:BBta_3062.
PATRIC21206947. VBIBraSp29847_3156.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0213.
HOGENOMHOG000252767.
KOK00758.
OrthoDBEOG61ZTGG.
ProtClustDBPRK04350.

Enzyme and pathway databases

BioCycBSP288000:GJBR-2911-MONOMER.

Family and domain databases

Gene3D3.40.1030.10. 1 hit.
3.90.1170.30. 1 hit.
HAMAPMF_00703. Thymid_phosp_2.
InterProIPR000312. Glycosyl_Trfase_fam3.
IPR017459. Glycosyl_Trfase_fam3_N_dom.
IPR013102. PYNP_C.
IPR000053. Pyrmidine_PPase.
IPR017872. Pyrmidine_PPase_CS.
IPR028579. Thym_Pase_Put.
IPR013466. Thymidine/AMP_Pase.
[Graphical view]
PANTHERPTHR10515. PTHR10515. 1 hit.
PfamPF02885. Glycos_trans_3N. 1 hit.
PF00591. Glycos_transf_3. 1 hit.
PF07831. PYNP_C. 1 hit.
[Graphical view]
PIRSFPIRSF000478. TP_PyNP. 1 hit.
SMARTSM00941. PYNP_C. 1 hit.
[Graphical view]
SUPFAMSSF47648. SSF47648. 1 hit.
SSF52418. SSF52418. 1 hit.
SSF54680. SSF54680. 1 hit.
TIGRFAMsTIGR02645. ARCH_P_rylase. 1 hit.
PROSITEPS00647. THYMID_PHOSPHORYLASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameTYPH_BRASB
AccessionPrimary (citable) accession number: A5EG87
Entry history
Integrated into UniProtKB/Swiss-Prot: January 15, 2008
Last sequence update: January 15, 2008
Last modified: February 19, 2014
This is version 43 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families