A5EG02 (A5EG02_BRASB) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 33.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 HAMAP MF_00191 EC=1.17.1.2 HAMAP MF_00191 | ||||
| Gene names |
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| Organism | Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP] EMBL ABQ35096.1 | ||||
| Taxonomic identifier | 288000 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium |
Protein attributes
| Sequence length | 314 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) By similarity. HAMAP MF_00191 |
| Catalytic activity | Dimethylallyl diphosphate + NAD(P)+ + H2O = (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + NAD(P)H. HAMAP MF_00191 Isopentenyl diphosphate + NAD(P)+ + H2O = (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + NAD(P)H. HAMAP MF_00191 |
| Cofactor | Binds 1 3Fe-4S cluster By similarity. HAMAP MF_00191 |
| Pathway | Isoprenoid biosynthesis; dimethylallyl diphosphate biosynthesis; dimethylallyl diphosphate from (2E)-4-hydroxy-3-methylbutenyl diphosphate: step 1/1. HAMAP MF_00191 Isoprenoid biosynthesis; isopentenyl diphosphate biosynthesis via DXP pathway; isopentenyl diphosphate from 1-deoxy-D-xylulose 5-phosphate: step 6/6. HAMAP MF_00191 |
| Sequence similarities | Belongs to the IspH family. HAMAP MF_00191 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Isoprene biosynthesis HAMAP MF_00191 |
| Ligand | 3Fe-4S HAMAP MF_00191 Iron Iron-sulfur Metal-binding NADP HAMAP MF_00191 |
| Molecular function | Oxidoreductase HAMAP MF_00191 EMBL ABQ35096.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway Inferred from electronic annotation. Source: HAMAP terpenoid biosynthetic processInferred from electronic annotation. Source: HAMAP |
| Molecular function | 3 iron, 4 sulfur cluster binding Inferred from electronic annotation. Source: UniProtKB-KW 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activityInferred from electronic annotation. Source: HAMAP metal ion bindingInferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Legumes symbioses: absence of nod genes in photosynthetic bradyrhizobia." Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.-C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z. Sadowsky M.Science 316:1307-1312(2007) [PubMed: 17540897] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000494 Genomic DNA. Translation: ABQ35096.1. |
| RefSeq | YP_001239002.1. NC_009485.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A5EG02. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 5152996. |
| GenomeReviews | Gene locus BBta_2972 in contig CP000494_GR. |
| KEGG | bbt:BBta_2972. |
| PATRIC | 21206769. VBIBraSp29847_3067. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0761. |
| HOGENOM | HBG335228. |
| OMA | HNQGKRY. |
| ProtClustDB | PRK01045. |
Family and domain databases | |
| HAMAP | MF_00191. IspH. [Tree] |
| InterPro | IPR003451. LytB. [Graphical view] |
| KO | K03527. |
| Pfam | PF02401. LYTB. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00216. IspH_lytB. 1 hit. |
| ProtoNet | Search... |
Entry information
| Entry name | A5EG02_BRASB | ||||||||
| Accession | Primary (citable) accession number: A5EG02 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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