A5EA66 (A5EA66_BRASB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase, ATP-dependent EMBL ABQ33060.1

Gene names

Ordered Locus Names:

BBta_0798 EMBL ABQ33060.1

Organism

Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP] EMBL ABQ33060.1

Taxonomic identifier

288000 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	648 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABQ33060.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5EA66 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: CA2ADBA169C65DBA	FASTA	648	71,225
	10 20 30 40 50 60 MNRFAELLDR LAYEPGRNNK LRLLTAYFRE AEDPDRGYAL GALTGALSFK HAKPALIRDL 70 80 90 100 110 120 IAARTDPVLF ALSYDYVGDL SETVALMWPK GGAHQQQHVA GSPPPQPSPT RGEGAQLRVA 130 140 150 160 170 180 LAPGMPSAMG PTASTGRAAS TAGTASNVAP TDILRSSAPA LSIPSPLVGE GQGGGVPTGS 190 200 210 220 230 240 LPEALPPGAH AAGHNNPPPP TLTEVVTTLR TLGKTEMPRQ LAQWLDELDE TGRWALLKLV 250 260 270 280 290 300 TGALRIGISA RLAKTAAAAL GDKDPHEVEL VWPGLSPPYL DLFAWLEGRG DKPVNSDPAP 310 320 330 340 350 360 FRPVMLAHAV EDDDFESMNA ADYIAEWKWD GIRVQAVSGR DSDGCIVTRL YSRSGEDITP 370 380 390 400 410 420 SFPDLLPSLH LPGALDGELL VVREKRVQSF NVLQQRLNRK TVSPKLMKEY PIHLRAYDLL 430 440 450 460 470 480 SDEGSDLRER PFAERREQLE AFIRRLDDPR VDLSPTIAFA SWDELKAARA NPASAGAGDD 490 500 510 520 530 540 AEAVEGVMLK RRDAPYLPGR PKGQWWKWKH DPHIIDAVLM YAQRGHGKRS SYYSDYTFGV 550 560 570 580 590 600 WTAGEAGDQL VPVGKAYFGF TDEELLQIDR FVRRNTTEKF GPVRHVVHEP EQGLVLEVAF 610 620 630 640 EGLQRSPRHK SGIAMRFPRI NRLRWDKPPR DADRLETLER LLKSETAG

References

[1]

"Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia." Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z. , Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M. Science 316:1307-1312(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BTAi1 / ATCC BAA-1182.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000494 Genomic DNA. Translation: ABQ33060.1.
RefSeq	YP_001236966.1. NC_009485.1.
3D structure databases
ProteinModelPortal	A5EA66.
ModBase	Search...
Protein-protein interaction databases
STRING	288000.BBta_0798.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABQ33060; ABQ33060; BBta_0798.
GeneID	5154054.
KEGG	bbt:BBta_0798.
PATRIC	21202572. VBIBraSp29847_0983.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000036007.
KO	K01971.
OMA	KHAKPAL.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	BSP288000:GJBR-764-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5EA66_BRASB

Accession

Primary (citable) accession number: A5EA66

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)