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Protein
Submitted name:

Putative DNA ligase, ATP-dependent

Gene

BBta_0798

Organism
Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSP288000:GJBR-764-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligase, ATP-dependentImported
Gene namesi
Ordered Locus Names:BBta_0798Imported
OrganismiBradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)Imported
Taxonomic identifieri288000 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000000246: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi288000.BBta_0798.

Structurei

3D structure databases

ProteinModelPortaliA5EA66.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKHAKPAL.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5EA66-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRFAELLDR LAYEPGRNNK LRLLTAYFRE AEDPDRGYAL GALTGALSFK
60 70 80 90 100
HAKPALIRDL IAARTDPVLF ALSYDYVGDL SETVALMWPK GGAHQQQHVA
110 120 130 140 150
GSPPPQPSPT RGEGAQLRVA LAPGMPSAMG PTASTGRAAS TAGTASNVAP
160 170 180 190 200
TDILRSSAPA LSIPSPLVGE GQGGGVPTGS LPEALPPGAH AAGHNNPPPP
210 220 230 240 250
TLTEVVTTLR TLGKTEMPRQ LAQWLDELDE TGRWALLKLV TGALRIGISA
260 270 280 290 300
RLAKTAAAAL GDKDPHEVEL VWPGLSPPYL DLFAWLEGRG DKPVNSDPAP
310 320 330 340 350
FRPVMLAHAV EDDDFESMNA ADYIAEWKWD GIRVQAVSGR DSDGCIVTRL
360 370 380 390 400
YSRSGEDITP SFPDLLPSLH LPGALDGELL VVREKRVQSF NVLQQRLNRK
410 420 430 440 450
TVSPKLMKEY PIHLRAYDLL SDEGSDLRER PFAERREQLE AFIRRLDDPR
460 470 480 490 500
VDLSPTIAFA SWDELKAARA NPASAGAGDD AEAVEGVMLK RRDAPYLPGR
510 520 530 540 550
PKGQWWKWKH DPHIIDAVLM YAQRGHGKRS SYYSDYTFGV WTAGEAGDQL
560 570 580 590 600
VPVGKAYFGF TDEELLQIDR FVRRNTTEKF GPVRHVVHEP EQGLVLEVAF
610 620 630 640
EGLQRSPRHK SGIAMRFPRI NRLRWDKPPR DADRLETLER LLKSETAG
Length:648
Mass (Da):71,225
Last modified:June 12, 2007 - v1
Checksum:iCA2ADBA169C65DBA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000494 Genomic DNA. Translation: ABQ33060.1.
RefSeqiWP_012041111.1. NC_009485.1.
YP_001236966.1. NC_009485.1.

Genome annotation databases

EnsemblBacteriaiABQ33060; ABQ33060; BBta_0798.
GeneIDi5154054.
KEGGibbt:BBta_0798.
PATRICi21202572. VBIBraSp29847_0983.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000494 Genomic DNA. Translation: ABQ33060.1.
RefSeqiWP_012041111.1. NC_009485.1.
YP_001236966.1. NC_009485.1.

3D structure databases

ProteinModelPortaliA5EA66.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi288000.BBta_0798.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABQ33060; ABQ33060; BBta_0798.
GeneIDi5154054.
KEGGibbt:BBta_0798.
PATRICi21202572. VBIBraSp29847_0983.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiKHAKPAL.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciBSP288000:GJBR-764-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BTAi1 / ATCC BAA-1182Imported.

Entry informationi

Entry nameiA5EA66_BRASB
AccessioniPrimary (citable) accession number: A5EA66
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: January 7, 2015
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.