A5E899 (A5E899_BRASB) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative ATP-dependent DNA ligase EMBL ABQ32393.1
EC=6.5.1.1 EMBL ABQ32393.1

Gene names

Ordered Locus Names:

BBta_0092 EMBL ABQ32393.1

Organism

Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) [Complete proteome] [HAMAP] EMBL ABQ32393.1

Taxonomic identifier

288000 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Bradyrhizobiaceae › Bradyrhizobium

Protein attributes

Sequence length	337 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABQ32393.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5E899 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 328FAD5BDD4A7ABD	FASTA	337	37,259
	10 20 30 40 50 60 MEARSVDAIP RGHEWQYEPK WDGFRCLLAR HGADVTMQSK AGEDLARYFP EVAAAARALK 70 80 90 100 110 120 ATRFTLDGEL VVPQAKSFSF DALLQRIHPA ASRVKKLSVE TPALFLAFDL LATAKDAELM 130 140 150 160 170 180 ARPLHARRLA LEAFAKANFT DHPTFRLSPA TTRFATAQDW LAQSGGGSDG VIAKRIDLPY 190 200 210 220 230 240 QAGNRDGMQK IKRHRSADCV IGGFRYATNK GAQGRKLVGS LLLGLYDDDG LLHHVGFTSA 250 260 270 280 290 300 LKKEEKPALT DKLEPLIAPP GFTGNAPGGP SRWSTARSTE WCPLKPKLVI EVCYDHFSGD 310 320 330 RFRHGTSILR WRPDKSPRQC TFEQLKQTIA DPLKLLA

References

[1]

"Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia." Giraud E., Moulin L., Vallenet D., Barbe V., Cytryn E., Avarre J.C., Jaubert M., Simon D., Cartieaux F., Prin Y., Bena G., Hannibal L., Fardoux J., Kojadinovic M., Vuillet L., Lajus A., Cruveiller S., Rouy Z. , Mangenot S., Segurens B., Dossat C., Franck W.L., Chang W.S., Saunders E., Bruce D., Richardson P., Normand P., Dreyfus B., Pignol D., Stacey G., Emerich D., Vermeglio A., Medigue C., Sadowsky M. Science 316:1307-1312(2007) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: BTAi1 / ATCC BAA-1182.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000494 Genomic DNA. Translation: ABQ32393.1.
RefSeq	YP_001236299.1. NC_009485.1.
3D structure databases
ProteinModelPortal	A5E899.
ModBase	Search...
Protein-protein interaction databases
STRING	288000.BBta_0092.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABQ32393; ABQ32393; BBta_0092.
GeneID	5155453.
KEGG	bbt:BBta_0092.
PATRIC	21201184. VBIBraSp29847_0297.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222508.
KO	K01971.
OMA	FKIKHER.
ProtClustDB	PRK08224.
Enzyme and pathway databases
BioCyc	BSP288000:GJBR-88-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A5E899_BRASB

Accession

Primary (citable) accession number: A5E899

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)