A5E6D5 (A5E6D5_LODEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Asparaginyl-tRNA synthetase EMBL EDK46993.1

Gene names

ORF Names:

LELG_05174 EMBL EDK46993.1

Organism

Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus) [Complete proteome]

Taxonomic identifier

379508 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Lodderomyces

Protein attributes

Sequence length	549 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 EMBL EDK46993.1 Ligase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5E6D5 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: 62292DE3B50F2267	FASTA	549	61,663
	10 20 30 40 50 60 MSTVYVNEKS GKDAADATGS EQSPFASPAY ALYTNPDAKV LIYKQVEEGE DSKFEYVEIS 70 80 90 100 110 120 ASALKKAKKG AEGLKKKAEK QAKMKEETQN LPKVEALDLN SIEEDKSLPE AKKIKLGKIL 130 140 150 160 170 180 ENVDSRVLVQ GWIHRLRVQK GLAFITLRDG TGFLQCVLTG DLAKARQTQE LTIESTVAIK 190 200 210 220 230 240 GVISKLPEGK TAPGGVELKA DYYKILGLAP GGEDAFTNKI QEGADPSLLL DQRHLTLRGE 250 260 270 280 290 300 SLSAVMKVRA AFLKSIRRVY VEEGLLEVTP PCMVQTQVEG GSTLFKMDYY GEEAFLTQSS 310 320 330 340 350 360 QLYLETCLPA LGDVYCVQES FRAEKSHTRR HLSEYTHIEA ELGFLSFDDL LKHIETVIVK 370 380 390 400 410 420 TVQYVLEDPV AGKLIEQLNP GFKAPQLPFK RMQYIDALDW LNERGILNDE GKPFSFGDDI 430 440 450 460 470 480 AEAQERKMVD TINEPILLTR FPVEIKSFYM QKCKDDPRVT ESVDVLMPNV GEITGGSMRS 490 500 510 520 530 540 YEYEDLLAGF KREKIDPAPY YWFLDQRRYG TCEHGGYGLG TERILAWLCD RFTVRDCSLY PRFTGRCKP

References

[1]

"Evolution of pathogenicity and sexual reproduction in eight Candida genomes." Butler G., Rasmussen M.D., Lin M.F., Santos M.A.S., Sakthikumar S., Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., Agrafioti I., Arnaud M.B., Bates S., Brown A.J.P., Brunke S., Costanzo M.C., Fitzpatrick D.A., de Groot P.W.J. , Harris D., Hoyer L.L., Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A.T., Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P.H., Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., Heitman J., Gow N.A.R., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A. Nature 459:657-662(2009) [PubMed: 19465905] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 11503 / CBS 2605 / IFO 1676 / JCM 1781 / NRRL YB-4239 and ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH981531 Genomic DNA. Translation: EDK46993.1.
RefSeq	XP_001523758.1. XM_001523708.1.
3D structure databases
ProteinModelPortal	A5E6D5.
ModBase	Search...
Protein-protein interaction databases
STRING	A5E6D5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5230700.
KEGG	lel:LELG_05174.
Phylogenomic databases
OMA	CMVQTQV.
OrthoDB	EOG47WRX6.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01893.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF6. PTHR22594:SF6. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. AsnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5E6D5_LODEL

Accession

Primary (citable) accession number: A5E6D5

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	November 16, 2011
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)