A5E1Y1 (A5E1Y1_LODEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
60S ribosomal protein L4-B EMBL EDK45439.1

Gene names

ORF Names:

LELG_03618 EMBL EDK45439.1

Organism

Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus) [Complete proteome]

Taxonomic identifier

379508 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Debaryomycetaceae › Lodderomyces

Protein attributes

Sequence length	363 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein EMBL EDK45439.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A5E1Y1 [UniParc]. Last modified June 12, 2007. Version 1. Checksum: E0BC8BD8712FCDE1	FASTA	363	39,292
	10 20 30 40 50 60 MSSRPQVSVV TVSGEQASSQ LPLPAVFSAP VRPDIVHSVF VRINKNKRQA YAVAENAGHQ 70 80 90 100 110 120 TSAESWGTGR AVARIPRVGG GGTHRSGQAA FGNMCRGGRM FAPTKTWRRW NVKVNHNEKR 130 140 150 160 170 180 YATASAIAAS AVTSLVLARG HRVENVKEIP LVVSNEFESV TKTKDAVAVL KAVGAHKDVV 190 200 210 220 230 240 KVIKSKKMRA GKGKLRGRRF TQRRGPLVVY GEDKGLVKAL RNIPGVETSS VKHLGLLQLA 250 260 270 280 290 300 PGAHLGRFII WTESAIEALD SIYGSESTKS IKSNYSLPAN IISNTDVTRL INSAEVQAVV 310 320 330 340 350 360 RPANESTQKK THVLKKNPLK NKQVLLRLNP YAKAYSAEKL GSAKVEKSKA KPSKGQFASV LKN

References

[1]

"Evolution of pathogenicity and sexual reproduction in eight Candida genomes." Butler G., Rasmussen M.D., Lin M.F., Santos M.A.S., Sakthikumar S., Munro C.A., Rheinbay E., Grabherr M., Forche A., Reedy J.L., Agrafioti I., Arnaud M.B., Bates S., Brown A.J.P., Brunke S., Costanzo M.C., Fitzpatrick D.A., de Groot P.W.J. , Harris D., Hoyer L.L., Hube B., Klis F.M., Kodira C., Lennard N., Logue M.E., Martin R., Neiman A.M., Nikolaou E., Quail M.A., Quinn J., Santos M.C., Schmitzberger F.F., Sherlock G., Shah P., Silverstein K.A.T., Skrzypek M.S., Soll D., Staggs R., Stansfield I., Stumpf M.P.H., Sudbery P.E., Srikantha T., Zeng Q., Berman J., Berriman M., Heitman J., Gow N.A.R., Lorenz M.C., Birren B.W., Kellis M., Cuomo C.A. Nature 459:657-662(2009) [PubMed: 19465905] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 11503 / CBS 2605 / IFO 1676 / JCM 1781 / NRRL YB-4239 and ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CH981527 Genomic DNA. Translation: EDK45439.1.
RefSeq	XP_001525690.1. XM_001525640.1.
3D structure databases
ProteinModelPortal	A5E1Y1.
SMR	A5E1Y1. Positions 7-262.
ModBase	Search...
Protein-protein interaction databases
STRING	A5E1Y1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5232578.
KEGG	lel:LELG_03618.
Phylogenomic databases
OMA	TKAFRNI.
OrthoDB	EOG4GF6PS.
Family and domain databases
InterPro	IPR002136. Ribosomal_L4/L1e. IPR013000. Ribosomal_L4/L1e_euk/arc_CS. IPR023574. Ribosomal_L4_dom. [Graphical view]
Gene3D	G3DSA:3.40.1370.10. G3DSA:3.40.1370.10. 1 hit.
KO	K02930.
Pfam	PF00573. Ribosomal_L4. 1 hit. [Graphical view]
SUPFAM	SSF52166. Ribosomal_L4/L1E. 1 hit.
PROSITE	PS00939. RIBOSOMAL_L1E. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A5E1Y1_LODEL

Accession

Primary (citable) accession number: A5E1Y1

Entry history

Integrated into UniProtKB/TrEMBL:	June 12, 2007
Last sequence update:	June 12, 2007
Last modified:	November 16, 2011
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)