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Protein
Submitted name:

Helicase SWR1

Gene

LELG_02480

Organism
Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHelicaseImported, Hydrolase
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Helicase SWR1Imported
Gene namesi
ORF Names:LELG_02480Imported
OrganismiLodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)Imported
Taxonomic identifieri379508 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeCandida/Lodderomyces cladeLodderomyces
Proteomesi
  • UP000001996 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi379508.XP_001525922.1.

Structurei

3D structure databases

ProteinModelPortaliA5DYP3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini510 – 582HSAInterPro annotationAdd BLAST73
Domaini960 – 1125Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1495 – 1648Helicase C-terminalInterPro annotationAdd BLAST154

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili304 – 340Sequence analysisAdd BLAST37
Coiled coili851 – 887Sequence analysisAdd BLAST37

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0388. Eukaryota.
KOG0391. Eukaryota.
COG0553. LUCA.
InParanoidiA5DYP3.
KOiK11681.
OMAiYFLMPSS.
OrthoDBiEOG092C1YH4.

Family and domain databases

CDDicd00079. HELICc. 1 hit.
InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR014012. HSA_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF07529. HSA. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS51204. HSA. 1 hit.

Sequencei

Sequence statusi: Complete.

A5DYP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPNARTGKRL LSRLSQNTTS TSEDSFELLN LQRNKRQSPN PYANSNGNDN
60 70 80 90 100
DSVDQQQEQP QKKKPKTQGK TKEVQLATIL TDFAEAVNEL YQLLEYASIV
110 120 130 140 150
AWKPNEFSEN NPQQLLREHY KAFCDDNNYR IKWNDEIEDD TSIKSLPLRF
160 170 180 190 200
QRKKLTEREN ALQNMYPFRK EVFTLQKQME ENRYISKKPE VNQKLNLDPQ
210 220 230 240 250
QQWQQGQQEQ QEQQQEQQQE QLPGKLKSTT TNNKTNTSKK VVKKVEPPPK
260 270 280 290 300
SNDKLKSKPK SKHKPTLRAR EIESSEIKEI EKNEKITEID VATKESTDDK
310 320 330 340 350
LVEHSDDEEG LKVHEEQIEE EEEEEEEEEE GEEAEEKSDQ SPNPHGVFHN
360 370 380 390 400
NSKKVSVSLT VPSLLITHPS HIPGWQPQPQ DQMQTDIAAT ERDLQHLDYQ
410 420 430 440 450
PQTIRVTNLN NAQREVTSSL SQRLSTFLEN RYKTPIIDEA NAIDFAYTKE
460 470 480 490 500
EYDEINKQQQ KMFKDIYNKI YAENTLVFSN QKIERRKIVL PPSSSNFKLN
510 520 530 540 550
DPFRNANAVS PKLPGTSNNM TFQDHLVAQG ASFSRIHHQM RKQHINRARK
560 570 580 590 600
VALIVDQHFK RKRGEKERLQ RERELSLKKL SRTVMQAVKR RWNEAAKVYS
610 620 630 640 650
IIQSEKDEEL KKIKGREHLS QMLEHSTQLL EAQLISSREQ TADAESNFDN
660 670 680 690 700
SEMLPLSDDF DASKDSDDYL SSSDSDDDNE NNDYEGAKPL SKMSSNQNLT
710 720 730 740 750
EISSTDDNDF NLSVDELRKK YAGIEGSMEA AELSEIKTND IKMKNLEDDD
760 770 780 790 800
KNGINTKNDS QELITNSESE TTALSIKNGK MSGKTSINES EDNLGSEVDN
810 820 830 840 850
DSSDADAKPV SSLISLLGGG MEDSDDDDDD EDAELDSVYS SSDEEMSTSG
860 870 880 890 900
DDDDDDEKEE EEEEKETEEE ETEEKQKEKE VESEKDTEVG VEKEVNGESK
910 920 930 940 950
ANNRETPISN GHVDDTHKES EEDTGAVEII NGAKVKDVPV PQLLRGTLRP
960 970 980 990 1000
YQKQGLNWLA SLYNNNTNGI LADEMGLGKT IQTISLLAYL ACEHHVWGPH
1010 1020 1030 1040 1050
LIVVPTSVML NWDMEFKKFA PGFKVLTYYG SPQQRAQKRK GWFKPDAFHV
1060 1070 1080 1090 1100
CITSYQLVVQ DQQAFKRKKW RYMILDEAHN IKNFRSTRWR ALLNFNTENR
1110 1120 1130 1140 1150
LLLTGTPLQN NLMELWSLLY FLMPSSKANM AMPEGFANLE DFQQWFGKPV
1160 1170 1180 1190 1200
DKILEQTTLT NNADLIDENE KTTSKMDEET RNTVSRLHQV LRPYILRRLK
1210 1220 1230 1240 1250
KDVEKQMPGK YEHIVYCRLS KRQRYLYDDF MSRAKTKETL MSGNFLSIIN
1260 1270 1280 1290 1300
CLMQLRKVCN HPDLFEVRPI VTSFAMPEAV SSTYLAINSA VQNWTNGNAM
1310 1320 1330 1340 1350
DCVDLKVLNL DITRHENLDY FVADSASKLV SITDFEKQIA QLKSVSSEVN
1360 1370 1380 1390 1400
TFENPHYVKS YQQLKALDQI EARDKIQHVS YINKLRCNRK PIYGKSLLNK
1410 1420 1430 1440 1450
LKIVKPVDSN DTSIQLGITV SQRAELMTDA IEKFSILTPS VVTLDLNNQM
1460 1470 1480 1490 1500
FSKSLQDRVH SEVLDGKILN PFHQSQVKLS IAFPDKTLLQ YDCGKLQKLA
1510 1520 1530 1540 1550
TLMRDLVANG HRALIFTQMT KVLDILEQFL NIHGYRYMRL DGATKIEDRQ
1560 1570 1580 1590 1600
LLTEKFNRDP KIPVFILSTR SGGLGINLTG ADTVIFYDSD WNPAMDKQCQ
1610 1620 1630 1640 1650
DRCHRIGQVR DVHIYRFVSE YTIESNIIKK ANQKRQLDNV VIQEGEFTTD
1660 1670 1680 1690 1700
YFGKFSVRDL VSDSNVTDIA ERTIDFSGDS KMGSVLAQAE DEEDRAAAGA
1710 1720 1730 1740 1750
AMKEVAVDDE DFTEDANGRR ENSDLALNTA TANDEGDADM DLDYDEGIGH
1760
IDEYMLRFIS EGYL
Length:1,764
Mass (Da):202,212
Last modified:June 12, 2007 - v1
Checksum:i0994A5C4DD17455B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH981526 Genomic DNA. Translation: EDK44301.1.
RefSeqiXP_001525922.1. XM_001525872.1.

Genome annotation databases

EnsemblFungiiEDK44301; EDK44301; LELG_02480.
GeneIDi5233264.
KEGGilel:LELG_02480.

Similar proteinsi

Entry informationi

Entry nameiA5DYP3_LODEL
AccessioniPrimary (citable) accession number: A5DYP3
Entry historyiIntegrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: October 25, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported