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A5DXN9

- A5DXN9_LODEL

UniProt

A5DXN9 - A5DXN9_LODEL

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Protein
DNA ligase
Gene
LELG_02126
Organism
Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:LELG_02126Imported
OrganismiLodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)Imported
Taxonomic identifieri379508 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeLodderomyces
ProteomesiUP000001996: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi36914.A5DXN9.

Structurei

3D structure databases

ProteinModelPortaliA5DXN9.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.
OMAiMVKMLEG.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5DXN9-1 [UniParc]FASTAAdd to Basket

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MHLLRRNLIK TEKLVKLKCL GCLKNTTMAQ QQTLGRFFGS SASIQASKPK    50
AKAKAEKTTT SPTKSAPIKL TKRANSLDKN GDVTSSLSAK KRKVTASNQD 100
YEDANLSLNN DRSSQENNSE EMDSEMTTEN NEKEKEEAKS LIKLSEEQQK 150
NKTQGSENQK SLATAKIPYS LLTDIFESIE HESSRLKITA IISQFFLEIL 200
QQQQQEGDVS KLVKIVYLFI NRLGPDYEPD LELGLGETLL IKAISECYGR 250
TPTKIKQDYK EVGDLGLVAQ KSRSGQPTMF KSADLDVDTV FENLTKIAKS 300
TGKDSQLKKI GIINKMLTAC QLKHNEAKFL IRSLEGKLRI GLAEKTVLVG 350
LAQAFVNFEA WKNNGNNKRI DPAKLVEAED TMREAFTRIP NYQVLIENAY 400
KYGIFNLLDH SQLTPGIPLK PMLAKPTKSM SEVLDRFQDE KFTCEYKYDG 450
ERAQVHLSSD GQVRIYSRNS EDMSQRYPDL ISIIKEFSKT QEHTSMILDC 500
EAVAWDRVQK KILPFQVLST RKRKDVNEKD ITVFICLFAF DILYYNNTSL 550
ITKSLKERRE IMFKHLTPIE GKFQFATSKD STSLEVLQQF LDQSVKDSCE 600
GLMVKMLEGT ESYYEPSKRS RNWLKLKKDY LEGVGDSLDL VVIGAYSGRG 650
KRTGTYGGFL LASYNQDTGD LETTCKIGTG FSEEDLAKLY ERLHPTEIPK 700
AKEYFVYDKT NSNAVPDVWF EPSVLFEVLT ADLSLSPIYK AAHSEYGKGI 750
SLRFPRFLRL RDDKDIEDAT SSTQVSEFYQ RQAHLL 786
Length:786
Mass (Da):89,154
Last modified:June 12, 2007 - v1
Checksum:iBB98B5461F68379A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH981525 Genomic DNA. Translation: EDK43947.1.
RefSeqiXP_001527297.1. XM_001527247.1.

Genome annotation databases

GeneIDi5234261.
KEGGilel:LELG_02126.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH981525 Genomic DNA. Translation: EDK43947.1 .
RefSeqi XP_001527297.1. XM_001527247.1.

3D structure databases

ProteinModelPortali A5DXN9.
ModBasei Search...

Protein-protein interaction databases

STRINGi 36914.A5DXN9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5234261.
KEGGi lel:LELG_02126.

Phylogenomic databases

KOi K10747.
OMAi MVKMLEG.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239.

Entry informationi

Entry nameiA5DXN9_LODEL
AccessioniPrimary (citable) accession number: A5DXN9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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