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A5DXN9 (A5DXN9_LODEL) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 49. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length786 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
A5DXN9 [UniParc].

Last modified June 12, 2007. Version 1.
Checksum: BB98B5461F68379A

FASTA78689,154
        10         20         30         40         50         60 
MHLLRRNLIK TEKLVKLKCL GCLKNTTMAQ QQTLGRFFGS SASIQASKPK AKAKAEKTTT 

        70         80         90        100        110        120 
SPTKSAPIKL TKRANSLDKN GDVTSSLSAK KRKVTASNQD YEDANLSLNN DRSSQENNSE 

       130        140        150        160        170        180 
EMDSEMTTEN NEKEKEEAKS LIKLSEEQQK NKTQGSENQK SLATAKIPYS LLTDIFESIE 

       190        200        210        220        230        240 
HESSRLKITA IISQFFLEIL QQQQQEGDVS KLVKIVYLFI NRLGPDYEPD LELGLGETLL 

       250        260        270        280        290        300 
IKAISECYGR TPTKIKQDYK EVGDLGLVAQ KSRSGQPTMF KSADLDVDTV FENLTKIAKS 

       310        320        330        340        350        360 
TGKDSQLKKI GIINKMLTAC QLKHNEAKFL IRSLEGKLRI GLAEKTVLVG LAQAFVNFEA 

       370        380        390        400        410        420 
WKNNGNNKRI DPAKLVEAED TMREAFTRIP NYQVLIENAY KYGIFNLLDH SQLTPGIPLK 

       430        440        450        460        470        480 
PMLAKPTKSM SEVLDRFQDE KFTCEYKYDG ERAQVHLSSD GQVRIYSRNS EDMSQRYPDL 

       490        500        510        520        530        540 
ISIIKEFSKT QEHTSMILDC EAVAWDRVQK KILPFQVLST RKRKDVNEKD ITVFICLFAF 

       550        560        570        580        590        600 
DILYYNNTSL ITKSLKERRE IMFKHLTPIE GKFQFATSKD STSLEVLQQF LDQSVKDSCE 

       610        620        630        640        650        660 
GLMVKMLEGT ESYYEPSKRS RNWLKLKKDY LEGVGDSLDL VVIGAYSGRG KRTGTYGGFL 

       670        680        690        700        710        720 
LASYNQDTGD LETTCKIGTG FSEEDLAKLY ERLHPTEIPK AKEYFVYDKT NSNAVPDVWF 

       730        740        750        760        770        780 
EPSVLFEVLT ADLSLSPIYK AAHSEYGKGI SLRFPRFLRL RDDKDIEDAT SSTQVSEFYQ 


RQAHLL 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH981525 Genomic DNA. Translation: EDK43947.1.
RefSeqXP_001527297.1. XM_001527247.1.

3D structure databases

ProteinModelPortalA5DXN9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING36914.A5DXN9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5234261.
KEGGlel:LELG_02126.

Phylogenomic databases

KOK10747.
OMAMVKMLEG.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5DXN9_LODEL
AccessionPrimary (citable) accession number: A5DXN9
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 14, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)