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Protein

Glucose starvation modulator protein 1

Gene

GSM1

Organism
Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Transcription factor which regulates nonfermentable carbon utilization.By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi20 – 4829Zn(2)-C6 fungal-typePROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding RNA polymerase II transcription factor activity Source: InterPro
  3. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding, Metal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
Glucose starvation modulator protein 1
Gene namesi
Name:GSM1
ORF Names:LELG_00882
OrganismiLodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)
Taxonomic identifieri379508 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeCandida/Lodderomyces cladeLodderomyces
ProteomesiUP000001996: Unassembled WGS sequence

Subcellular locationi

Nucleus PROSITE-ProRule annotation

GO - Cellular componenti

  1. nucleus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 707707Glucose starvation modulator protein 1PRO_0000406487Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi36914.A5DU46.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini522 – 59170PASAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi633 – 64614Poly-AsnAdd
BLAST

Sequence similaritiesi

Belongs to the ERT1/acuK family.Curated
Contains 1 PAS (PER-ARNT-SIM) domain.Curated
Contains 1 Zn(2)-C6 fungal-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiNOG48118.
InParanoidiA5DU46.
OMAiFIMELMY.
OrthoDBiEOG70KGZB.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5DU46-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTKRLTPQEK LSRKPASRAC TFCHQKHLQC SNERPCKNCV KRNIADQCQD
60 70 80 90 100
ITRKRVKYLT GANSKAVAAA TTPEATTTTP KRKQKRSVKG SPSISFPSSS
110 120 130 140 150
ISPINTSTFD TNGHPNGHPN DLLRQSLEAS QAGQAQAPSL LEIQGPFPQM
160 170 180 190 200
QTLQPTHTVA SETSSSYSQV QPQHHPESSV PPSAPPESVD QLQQLMMHDS
210 220 230 240 250
AYFNTNNVAL NPTNVLEADP FDGHTNTMLN TTTDVLNKLL NDHYEIDNIL
260 270 280 290 300
QPPDDALLVD QQQSSSEATG TSASKAVPMG PSHSNTHFSS NYLNEEYLML
310 320 330 340 350
GDILLQSKPT SPSPSNTSAS EYNMLSPSYT QNIDFDNIHL SKRKVVQKLK
360 370 380 390 400
DSRPFISLGF PKDSSLSLDN LNNMAHQTDN LLDNNVSSRG NNNTSNQKLQ
410 420 430 440 450
SAIASKTSKT NPIINFATKY STEYVSPLST HQIYQTVSDI YSKDVLNYEY
460 470 480 490 500
PNSYHALTHF LKTRFSGNNL PHEEKARKRQ NLLVILKLIA SYRPTFISAH
510 520 530 540 550
KSLLKPQDLL FLEMSFQRCL IDYEKLSQLN SSPTIIWRRT GEIVSITDDL
560 570 580 590 600
LSLLGYKLLD ILSKRTFIME IMYDDESIVK YFQLFKSVAV GNLHSSINTK
610 620 630 640 650
VKLIKNGGAV PGGGTSNGKY NYNNNYNHNY SHNNNNNNNS NNSNNNGMST
660 670 680 690 700
GAGNSGDGDG LENNVGTNSY IEFCSVWTVK RDLFDIPMLI IGQFLPILPA

GDGVRMY
Length:707
Mass (Da):78,473
Last modified:June 12, 2007 - v1
Checksum:i53B59B457AD67831
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH981524 Genomic DNA. Translation: EDK42704.1.
RefSeqiXP_001528362.1. XM_001528312.1.

Genome annotation databases

GeneIDi5234865.
KEGGilel:LELG_00882.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH981524 Genomic DNA. Translation: EDK42704.1.
RefSeqiXP_001528362.1. XM_001528312.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi36914.A5DU46.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5234865.
KEGGilel:LELG_00882.

Phylogenomic databases

eggNOGiNOG48118.
InParanoidiA5DU46.
OMAiFIMELMY.
OrthoDBiEOG70KGZB.

Family and domain databases

Gene3Di4.10.240.10. 1 hit.
InterProiIPR001138. Zn2-C6_fun-type_DNA-bd.
[Graphical view]
PfamiPF00172. Zn_clus. 1 hit.
[Graphical view]
SMARTiSM00066. GAL4. 1 hit.
[Graphical view]
SUPFAMiSSF57701. SSF57701. 1 hit.
PROSITEiPS00463. ZN2_CY6_FUNGAL_1. 1 hit.
PS50048. ZN2_CY6_FUNGAL_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239.

Entry informationi

Entry nameiGSM1_LODEL
AccessioniPrimary (citable) accession number: A5DU46
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 5, 2011
Last sequence update: June 12, 2007
Last modified: January 7, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.