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Protein

Glutamate decarboxylase

Gene

LELG_00357

Organism
Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:LELG_00357Imported
OrganismiLodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) (Yeast) (Saccharomyces elongisporus)Imported
Taxonomic identifieri379508 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeCandida/Lodderomyces cladeLodderomyces
ProteomesiUP000001996 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi379508.XP_001527837.1.

Structurei

3D structure databases

ProteinModelPortaliA5DSM1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiA5DSM1.
KOiK01580.
OMAiRCVSDIH.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A5DSM1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVLSKHINSL ELESTILKNL PKARLDNLEY IDQYDSQRLI PRFEIPFKSS
60 70 80 90 100
DGSLIHKYLN QELTLDGNPT LNLASFVNTW VDPTQIEIAV ENLTKNLADN
110 120 130 140 150
DEYPSLIDIQ ARCITMLSNL WHAPSRKDEA GNKIVDSIGT ATTGSSEAIM
160 170 180 190 200
LAGLALKKRW QEKRLAEGKD ISKPNILMAT CAQVALEKFA VYFDVENRLI
210 220 230 240 250
PISPESGHVI DTSKIRENID ENTIGIFVIL GSTFTGAFEP VEEIAQLLDE
260 270 280 290 300
HEKETGLDIR IHVDGASGGF VAPFAFPNLK WDFSIDRVDS INTSGHKFGM
310 320 330 340 350
TSVGLGWVIW KHADLLPKQL KFNLDYLGGV EETFGLNFSR PGFPVIMQYY
360 370 380 390 400
NFLTLGKEGY AAVFDGCMSN ARLLSDYLSE SKYFEVVSNI HKRLDEAGQK
410 420 430 440 450
KAYTKESHHQ LSDIWTINQQ FEPGLPVVAF RFSKEFRDKY PEVPQELFST
460 470 480 490 500
LLRKHGYIVP NYHLPPTEND VEILRVVVRN SMSLSLMSKL VSDCTKSAEL
510 520 530 540 550
LVKAAEFVRN YDHTKADKTL EQRTESIHEL LLTIASGGTA QVKKEQHEKT
560
GHESGKHKTS YRGTC
Length:565
Mass (Da):63,634
Last modified:June 12, 2007 - v1
Checksum:iB10495D5BBDA16CD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH981524 Genomic DNA. Translation: EDK42179.1.
RefSeqiXP_001527837.1. XM_001527787.1.

Genome annotation databases

GeneIDi5234828.
KEGGilel:LELG_00357.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CH981524 Genomic DNA. Translation: EDK42179.1.
RefSeqiXP_001527837.1. XM_001527787.1.

3D structure databases

ProteinModelPortaliA5DSM1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi379508.XP_001527837.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5234828.
KEGGilel:LELG_00357.

Phylogenomic databases

InParanoidiA5DSM1.
KOiK01580.
OMAiRCVSDIH.
OrthoDBiEOG7P2Z22.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 2 hits.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239Imported.

Entry informationi

Entry nameiA5DSM1_LODEL
AccessioniPrimary (citable) accession number: A5DSM1
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: June 24, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.