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A5DI82

- A5DI82_PICGU

UniProt

A5DI82 - A5DI82_PICGU

Protein

DNA ligase

Gene

PGUG_02983

Organism
Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 49 (01 Oct 2014)
      Sequence version 2 (22 Jul 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PGUG_02983Imported
    OrganismiMeyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii)Imported
    Taxonomic identifieri294746 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeMeyerozyma
    ProteomesiUP000001997: Unassembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi4929.A5DI82.

    Structurei

    3D structure databases

    ProteinModelPortaliA5DI82.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.40.50.10190. 1 hit.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5DI82-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSYLDNVEAP KNHLDDADFD FLVSQLFTKV DGVSHQNLGE FPTISSKKVY    50
    VIEQFIKQWK TFIGPDIMPA APLIFPNKAK RLYYIRDTTL ARLVVKMLKI 100
    SPKSQDYDKL FKWKKHYHEY KHHHRRDTRN LKSLPFIIAQ IYSERRDPDK 150
    IVKPTIKISE VNKVLETLTT DEASKSAQQV AILEPVVEKL TIEQLRWFFT 200
    ILLKISTLGS FETAFFERWH PDAPRLYGLC NNLSKVFWLL TDPEVRLTDD 250
    QLTIQPFYPF LPQLSQKVNI SYEKLCARMN NAFYIEEKMD GDRMILHFQD 300
    SRFKFFSRRT KDYTLLYGAS FQIGSLTKYL TDAFHPRVKS IVLDGEMVAW 350
    DFKRKVILPF GTLKTSAVQE AVRQFTTTDV FEEQSAWPLF IVFDVLHVNG 400
    KNLTNHKLSY RKQLLRSLIN EIPHKFELLP LMKGSDPDDI KLAIKNVISD 450
    RGEGLVIKNV DSKYHVAQRD NSWVKVKPEY LEQFGENLDL VIIGLIPAVK 500
    NSYMCGLRDK ENGNVFKSFC TVANGFTEGE FDRLERLTAG KWNNLKTNPP 550
    PTDLIQFGRK KPDFWINPND SVALEIKARS IDVSLEETYA VGTTLHNLYC 600
    RRIRDDKLIE DCVTLQEYRE MKLKYSSDFN KSQTILQGRK RKANSFLLEQ 650
    ASKQVKTEVT SNLFSNFQFL ILSDCKKSRD NERLSVEDLS RIVKSHGGML 700
    IRSHKLAKEP DRQTIVISEV AIPSTEAIVN YGLDILKSVW VFNCIESNAI 750
    VPLEPSMIFR TRSVDLLKNS SARLDVYGDS FTQRVDLPIV EFCRRIENPQ 800
    LTDNDIKCAK EEFLHELGDN PPLAFLFNDV KFLIVAAHNW AKDGLRRKVE 850
    RYGGQISETL GDCSFVVVAN EEGDETLAAR IDVISHDIAD SVSFSNSSNL 900
    PIPSIVKSSF IDSCIEHRVL VDAADFSIGR KSKMRKN 937
    Length:937
    Mass (Da):107,853
    Last modified:July 22, 2008 - v2
    Checksum:i11DEFA0C58280A80
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH408157 Genomic DNA. Translation: EDK38885.2.
    RefSeqiXP_001485254.1. XM_001485204.1.

    Genome annotation databases

    GeneIDi5126991.
    KEGGipgu:PGUG_02983.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CH408157 Genomic DNA. Translation: EDK38885.2 .
    RefSeqi XP_001485254.1. XM_001485204.1.

    3D structure databases

    ProteinModelPortali A5DI82.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4929.A5DI82.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5126991.
    KEGGi pgu:PGUG_02983.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.40.50.10190. 1 hit.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324Imported.

    Entry informationi

    Entry nameiA5DI82_PICGU
    AccessioniPrimary (citable) accession number: A5DI82
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: July 22, 2008
    Last modified: October 1, 2014
    This is version 49 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3