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A5DI82 (A5DI82_PICGU) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length937 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
A5DI82 [UniParc].

Last modified July 22, 2008. Version 2.
Checksum: 11DEFA0C58280A80

FASTA937107,853
        10         20         30         40         50         60 
MSYLDNVEAP KNHLDDADFD FLVSQLFTKV DGVSHQNLGE FPTISSKKVY VIEQFIKQWK 

        70         80         90        100        110        120 
TFIGPDIMPA APLIFPNKAK RLYYIRDTTL ARLVVKMLKI SPKSQDYDKL FKWKKHYHEY 

       130        140        150        160        170        180 
KHHHRRDTRN LKSLPFIIAQ IYSERRDPDK IVKPTIKISE VNKVLETLTT DEASKSAQQV 

       190        200        210        220        230        240 
AILEPVVEKL TIEQLRWFFT ILLKISTLGS FETAFFERWH PDAPRLYGLC NNLSKVFWLL 

       250        260        270        280        290        300 
TDPEVRLTDD QLTIQPFYPF LPQLSQKVNI SYEKLCARMN NAFYIEEKMD GDRMILHFQD 

       310        320        330        340        350        360 
SRFKFFSRRT KDYTLLYGAS FQIGSLTKYL TDAFHPRVKS IVLDGEMVAW DFKRKVILPF 

       370        380        390        400        410        420 
GTLKTSAVQE AVRQFTTTDV FEEQSAWPLF IVFDVLHVNG KNLTNHKLSY RKQLLRSLIN 

       430        440        450        460        470        480 
EIPHKFELLP LMKGSDPDDI KLAIKNVISD RGEGLVIKNV DSKYHVAQRD NSWVKVKPEY 

       490        500        510        520        530        540 
LEQFGENLDL VIIGLIPAVK NSYMCGLRDK ENGNVFKSFC TVANGFTEGE FDRLERLTAG 

       550        560        570        580        590        600 
KWNNLKTNPP PTDLIQFGRK KPDFWINPND SVALEIKARS IDVSLEETYA VGTTLHNLYC 

       610        620        630        640        650        660 
RRIRDDKLIE DCVTLQEYRE MKLKYSSDFN KSQTILQGRK RKANSFLLEQ ASKQVKTEVT 

       670        680        690        700        710        720 
SNLFSNFQFL ILSDCKKSRD NERLSVEDLS RIVKSHGGML IRSHKLAKEP DRQTIVISEV 

       730        740        750        760        770        780 
AIPSTEAIVN YGLDILKSVW VFNCIESNAI VPLEPSMIFR TRSVDLLKNS SARLDVYGDS 

       790        800        810        820        830        840 
FTQRVDLPIV EFCRRIENPQ LTDNDIKCAK EEFLHELGDN PPLAFLFNDV KFLIVAAHNW 

       850        860        870        880        890        900 
AKDGLRRKVE RYGGQISETL GDCSFVVVAN EEGDETLAAR IDVISHDIAD SVSFSNSSNL 

       910        920        930 
PIPSIVKSSF IDSCIEHRVL VDAADFSIGR KSKMRKN 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CH408157 Genomic DNA. Translation: EDK38885.2.
RefSeqXP_001485254.1. XM_001485204.1.

3D structure databases

ProteinModelPortalA5DI82.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4929.A5DI82.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5126991.
KEGGpgu:PGUG_02983.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA5DI82_PICGU
AccessionPrimary (citable) accession number: A5DI82
Entry history
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: July 22, 2008
Last modified: November 13, 2013
This is version 48 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)