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A5DI82

- A5DI82_PICGU

UniProt

A5DI82 - A5DI82_PICGU

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Protein

DNA ligase

Gene

PGUG_02983

Organism
Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PGUG_02983Imported
OrganismiMeyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) (Yeast) (Candida guilliermondii)Imported
Taxonomic identifieri294746 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeMeyerozyma
ProteomesiUP000001997: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi4929.A5DI82.

Structurei

3D structure databases

ProteinModelPortaliA5DI82.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

InParanoidiA5DI82.
KOiK10777.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A5DI82-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSYLDNVEAP KNHLDDADFD FLVSQLFTKV DGVSHQNLGE FPTISSKKVY
60 70 80 90 100
VIEQFIKQWK TFIGPDIMPA APLIFPNKAK RLYYIRDTTL ARLVVKMLKI
110 120 130 140 150
SPKSQDYDKL FKWKKHYHEY KHHHRRDTRN LKSLPFIIAQ IYSERRDPDK
160 170 180 190 200
IVKPTIKISE VNKVLETLTT DEASKSAQQV AILEPVVEKL TIEQLRWFFT
210 220 230 240 250
ILLKISTLGS FETAFFERWH PDAPRLYGLC NNLSKVFWLL TDPEVRLTDD
260 270 280 290 300
QLTIQPFYPF LPQLSQKVNI SYEKLCARMN NAFYIEEKMD GDRMILHFQD
310 320 330 340 350
SRFKFFSRRT KDYTLLYGAS FQIGSLTKYL TDAFHPRVKS IVLDGEMVAW
360 370 380 390 400
DFKRKVILPF GTLKTSAVQE AVRQFTTTDV FEEQSAWPLF IVFDVLHVNG
410 420 430 440 450
KNLTNHKLSY RKQLLRSLIN EIPHKFELLP LMKGSDPDDI KLAIKNVISD
460 470 480 490 500
RGEGLVIKNV DSKYHVAQRD NSWVKVKPEY LEQFGENLDL VIIGLIPAVK
510 520 530 540 550
NSYMCGLRDK ENGNVFKSFC TVANGFTEGE FDRLERLTAG KWNNLKTNPP
560 570 580 590 600
PTDLIQFGRK KPDFWINPND SVALEIKARS IDVSLEETYA VGTTLHNLYC
610 620 630 640 650
RRIRDDKLIE DCVTLQEYRE MKLKYSSDFN KSQTILQGRK RKANSFLLEQ
660 670 680 690 700
ASKQVKTEVT SNLFSNFQFL ILSDCKKSRD NERLSVEDLS RIVKSHGGML
710 720 730 740 750
IRSHKLAKEP DRQTIVISEV AIPSTEAIVN YGLDILKSVW VFNCIESNAI
760 770 780 790 800
VPLEPSMIFR TRSVDLLKNS SARLDVYGDS FTQRVDLPIV EFCRRIENPQ
810 820 830 840 850
LTDNDIKCAK EEFLHELGDN PPLAFLFNDV KFLIVAAHNW AKDGLRRKVE
860 870 880 890 900
RYGGQISETL GDCSFVVVAN EEGDETLAAR IDVISHDIAD SVSFSNSSNL
910 920 930
PIPSIVKSSF IDSCIEHRVL VDAADFSIGR KSKMRKN
Length:937
Mass (Da):107,853
Last modified:July 22, 2008 - v2
Checksum:i11DEFA0C58280A80
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH408157 Genomic DNA. Translation: EDK38885.2.
RefSeqiXP_001485254.1. XM_001485204.1.

Genome annotation databases

GeneIDi5126991.
KEGGipgu:PGUG_02983.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CH408157 Genomic DNA. Translation: EDK38885.2 .
RefSeqi XP_001485254.1. XM_001485204.1.

3D structure databases

ProteinModelPortali A5DI82.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4929.A5DI82.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5126991.
KEGGi pgu:PGUG_02983.

Phylogenomic databases

InParanoidi A5DI82.
KOi K10777.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.10190. 1 hit.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
PANTHERi PTHR10459:SF7. PTHR10459:SF7. 1 hit.
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324Imported.

Entry informationi

Entry nameiA5DI82_PICGU
AccessioniPrimary (citable) accession number: A5DI82
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: July 22, 2008
Last modified: October 29, 2014
This is version 50 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3