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Protein
Submitted name:

Ncoa3 protein

Gene

Ncoa3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ncoa3 proteinImported
Gene namesi
Name:Ncoa3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:1276535. Ncoa3.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiA5D6Q2.
PRIDEiA5D6Q2.

Expressioni

Gene expression databases

BgeeiA5D6Q2.
GenevisibleiA5D6Q2. MM.

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000085416.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini68 – 13164PAS (PER-ARNT-SIM)InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili913 – 94129Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG3561. Eukaryota.
ENOG410XRJI. LUCA.
HOVERGENiHBG052583.
KOiK11256.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
4.10.630.10. 2 hits.
InterProiIPR010011. DUF1518.
IPR032565. DUF4927.
IPR028818. NCOA3.
IPR009110. Nuc_rcpt_coact.
IPR014920. Nuc_rcpt_coact_Ncoa-typ.
IPR017426. Nuclear_rcpt_coactivator.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR014710. RmlC-like_jellyroll.
IPR014935. SRC-1.
IPR008955. Src1_rcpt_coact.
[Graphical view]
PANTHERiPTHR10684. PTHR10684. 2 hits.
PTHR10684:SF3. PTHR10684:SF3. 2 hits.
PfamiPF07469. DUF1518. 1 hit.
PF16279. DUF4927. 1 hit.
PF08815. Nuc_rec_co-act. 1 hit.
PF00989. PAS. 1 hit.
PF08832. SRC-1. 1 hit.
[Graphical view]
SMARTiSM01151. DUF1518. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
SSF69125. SSF69125. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

A5D6Q2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ELISANLSDI DNFNVKPDKC AILKETVRQI RQIKEQGKTI SSDDDVQKAD
60 70 80 90 100
VSSTGQGVID KDSLGPLLLQ ALDGFLFVVN RDGNIVFVSE NVTQYLQYKQ
110 120 130 140 150
EDLVNTSVYS ILHEQDRKDF LKHLPKSTVN GVSWTNENQR QKSHTFNCRM
160 170 180 190 200
LMKTHDILED VNASPETRQR YETMQCFALS QPRAMLEEGE DLQCCMICVA
210 220 230 240 250
RRVTAPFPSS PESFITRHDL SGKVVNIDTN SLRSSMRPGF EDIIRRCIQR
260 270 280 290 300
FFSLNDGQSW SQKRHYQEAY VHGHAETPVY RFSLADGTIV SAQTKSKLFR
310 320 330 340 350
NPVTNDRHGF ISTHFLQREQ NGYRPNPNPA GQGIRPPAAG CGVSMSPNQN
360 370 380 390 400
VQMMGSRTYG VPDPSNTGQM GGARYGASSS VASLTPGQSL QSPSSYQNSS
410 420 430 440 450
YGLSMSSPPH GSPGLGPNQQ NIMISPRNRG SPKMASHQFS PAAGAHSPMG
460 470 480 490 500
PSGNTGSHSF SSSSLSALQA ISEGVGTSLL STLSSPGPKL DNSPNMNISQ
510 520 530 540 550
PSKVSGQDSK SPLGLYCEQN PVESSVCQSN SRDHPSEKES KESSGEVSET
560 570 580 590 600
PRGPLESKGH KKLLQLLTCS SDDRGHSSLT NSPLDPNCKD SSVSVTSPSG
610 620 630 640 650
VSSSTSGTVS STSNVHGSLL QEKHRILHKL LQNGNSPAEV AKITAEATGK
660 670 680 690 700
DTSSTASCGE GTTRQEQLSP KKKENNALLR YLLDRDDPSD VLAKELQPQA
710 720 730 740 750
DSGDSKLSQC SCSTNPSSGQ EKDPKIKTET NEEVSGDLDN LDAILGDLTS
760 770 780 790 800
SDFYNNPTNG GHPGAKQQMF AGPSSLGLRS PQPVQSVRPP YNRAVSLDSP
810 820 830 840 850
VSVGSGPPVK NVSAFPGLPK QPILAGNPRM MDSQENYGAN MGPNRNVPVN
860 870 880 890 900
PTSSPGDWGL ANSRASRMEP LASSPLGRTG ADYSATLPRP AMGGSVPTLP
910 920 930 940 950
LRSNRLPGAR PSLQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QMLQMRTGEI
960 970 980 990 1000
PMGMGVNPYS PAVPSNQPGS WPEGMLSMEQ GPHGSQNRPL LRNSLDDLLG
1010 1020 1030 1040 1050
PPSNAEGQSD ERALLDQLHT LLSNTDATGL EEIDRALGIP ELVNQGQALE
1060 1070 1080 1090 1100
SKQDVFQGQE AAVMMDQKAA LYGQTYPAQG PPLQGGFNLQ GQSPSFNSMM
1110 1120 1130 1140 1150
GQISQQGSFP LQGMHPRAGL VRPRTNTPKQ LRMQLQQRLQ GQQFLNQSRQ
1160 1170 1180 1190 1200
ALEMKMENPA GTAVMRPMMP QQAFFNAQMA AQQKRELMSH HLQQQRMAMM
1210 1220 1230 1240 1250
MSQPQPQAFS PPPNVTASPS MDGVLAGSAM PQAPPQQFPY PANYGMGQPP
1260 1270 1280 1290 1300
EPAFGRGSSP PSAMMSSRMG PSQNAMVQHP QPTPMYQPSD MKGWPSGNLA
1310 1320 1330 1340 1350
RNGSFPQQQF APQGNPAAYN MVHMNSSGGH LGQMAMTPMP MSGMPMGPDQ

KYC
Length:1,353
Mass (Da):146,403
Last modified:June 12, 2007 - v1
Checksum:iB08B9646D2C0B0F9
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC093478 mRNA. Translation: AAH93478.1.
RefSeqiNP_032705.2. NM_008679.3.
UniGeneiMm.469663.

Genome annotation databases

GeneIDi17979.
KEGGimmu:17979.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC093478 mRNA. Translation: AAH93478.1.
RefSeqiNP_032705.2. NM_008679.3.
UniGeneiMm.469663.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000085416.

Proteomic databases

PaxDbiA5D6Q2.
PRIDEiA5D6Q2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi17979.
KEGGimmu:17979.

Organism-specific databases

CTDi8202.
MGIiMGI:1276535. Ncoa3.

Phylogenomic databases

eggNOGiKOG3561. Eukaryota.
ENOG410XRJI. LUCA.
HOVERGENiHBG052583.
KOiK11256.

Miscellaneous databases

ChiTaRSiNcoa3. mouse.
NextBioi292947.
SOURCEiSearch...

Gene expression databases

BgeeiA5D6Q2.
GenevisibleiA5D6Q2. MM.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
4.10.630.10. 2 hits.
InterProiIPR010011. DUF1518.
IPR032565. DUF4927.
IPR028818. NCOA3.
IPR009110. Nuc_rcpt_coact.
IPR014920. Nuc_rcpt_coact_Ncoa-typ.
IPR017426. Nuclear_rcpt_coactivator.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR014710. RmlC-like_jellyroll.
IPR014935. SRC-1.
IPR008955. Src1_rcpt_coact.
[Graphical view]
PANTHERiPTHR10684. PTHR10684. 2 hits.
PTHR10684:SF3. PTHR10684:SF3. 2 hits.
PfamiPF07469. DUF1518. 1 hit.
PF16279. DUF4927. 1 hit.
PF08815. Nuc_rec_co-act. 1 hit.
PF00989. PAS. 1 hit.
PF08832. SRC-1. 1 hit.
[Graphical view]
SMARTiSM01151. DUF1518. 1 hit.
SM00091. PAS. 1 hit.
[Graphical view]
SUPFAMiSSF55785. SSF55785. 2 hits.
SSF69125. SSF69125. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: C57BL/6Imported.
    Tissue: BrainImported.

Entry informationi

Entry nameiA5D6Q2_MOUSE
AccessioniPrimary (citable) accession number: A5D6Q2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: May 11, 2016
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.