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Protein
Submitted name:

Ribosomal protein HS6-type

Gene

RPL8A

Organism
Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

BioCyciPTHE370438:GCGQ-331-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal protein HS6-typeImported
Gene namesi
Name:RPL8AImported
Ordered Locus Names:PTH_0314Imported
OrganismiPelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI)Imported
Taxonomic identifieri370438 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptococcaceaePelotomaculum
ProteomesiUP000006556 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi370438.PTH_0314.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1358.
HOGENOMiHOG000055225.
KOiK07590.
OMAiELGKICG.
OrthoDBiEOG6B8XRH.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.

Sequencei

Sequence statusi: Complete.

A5D5I4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYERLLSAR KKTVGTKQTL KAIERGQAKV VYVAQNADRH VIEPVLSLCA
60 70 80
AKNIPVIQVD SMLALGKACH IDVGCAAAAV TEE
Length:83
Mass (Da):8,876
Last modified:June 12, 2007 - v1
Checksum:i1F064B8000891F43
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009389 Genomic DNA. Translation: BAF58495.1.
RefSeqiWP_011928394.1. NC_009454.1.
YP_001210864.1. NC_009454.1.

Genome annotation databases

EnsemblBacteriaiBAF58495; BAF58495; PTH_0314.
KEGGipth:PTH_0314.
PATRICi22907452. VBIPelThe8413_0348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP009389 Genomic DNA. Translation: BAF58495.1.
RefSeqiWP_011928394.1. NC_009454.1.
YP_001210864.1. NC_009454.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi370438.PTH_0314.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAF58495; BAF58495; PTH_0314.
KEGGipth:PTH_0314.
PATRICi22907452. VBIPelThe8413_0348.

Phylogenomic databases

eggNOGiCOG1358.
HOGENOMiHOG000055225.
KOiK07590.
OMAiELGKICG.
OrthoDBiEOG6B8XRH.

Enzyme and pathway databases

BioCyciPTHE370438:GCGQ-331-MONOMER.

Family and domain databases

Gene3Di3.30.1330.30. 1 hit.
InterProiIPR029064. L30e-like.
IPR004038. Ribosomal_L7Ae/L30e/S12e/Gad45.
[Graphical view]
PfamiPF01248. Ribosomal_L7Ae. 1 hit.
[Graphical view]
SUPFAMiSSF55315. SSF55315. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genome of Pelotomaculum thermopropionicum reveals niche-associated evolution in anaerobic microbiota."
    Kosaka T., Kato S., Shimoyama T., Ishii S., Abe T., Watanabe K.
    Genome Res. 18:442-448(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 13744 / JCM 10971 / SIImported.

Entry informationi

Entry nameiA5D5I4_PELTS
AccessioniPrimary (citable) accession number: A5D5I4
Entry historyi
Integrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: April 1, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.