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A5CWB0

- A5CWB0_VESOH

UniProt

A5CWB0 - A5CWB0_VESOH

Protein
Submitted name:

Ribulose-bisphosphate carboxylase form II

Gene

cbbM

Organism
Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (12 Jun 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciCVES412965:GHZZ-652-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-bisphosphate carboxylase form IIImported (EC:4.1.1.39Imported)
    Gene namesi
    Name:cbbMImported
    Ordered Locus Names:COSY_0653Imported
    OrganismiVesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA)Imported
    Taxonomic identifieri412965 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriasulfur-oxidizing symbionts
    ProteomesiUP000000247: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi412965.COSY_0653.

    Structurei

    3D structure databases

    ProteinModelPortaliA5CWB0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1850.
    HOGENOMiHOG000230831.
    KOiK01601.
    OMAiLDYYLEC.
    OrthoDBiEOG66QKT8.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPiMF_01339. RuBisCO_L_type2.
    InterProiIPR020871. RuBisCO.
    IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A5CWB0-1 [UniParc]FASTAAdd to Basket

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    MDQSNRYADL SLDEDTLLAE GGHILVAYTM NIMPNFGGYL ETAAHFAAES    50
    STGTNVEVST TDDFTKDLDA MVYEIDEVKG IMKIAYPCGL FDRNLIDGRA 100
    MVVSFLTLAI GNNQGMGDVK CAQMIDFHVP KQMLDIFDGP SVDITDLWNL 150
    LGRDRKNGGY IAGTIIKPKL GLRPQPFAEA AYQFWLGGDF IKNDEPQGNQ 200
    VYARMKDVMP LVSDAMKRAQ DETGEAKIFS ANITADDYHE MIARGEYILE 250
    AFGENAHHVA FLVDGYVGGC GMVTTARRNF PGQYLHYHRA GHGAITSPSS 300
    VRGYTALVLA KLSRLMGASG IHVGTMGYGK MEGGADDRNI AYMIERDSAD 350
    GPVYHQEWFG MKPTTPIISG GMNALRLPGF FENLGHGNVI NTSGGGSYGH 400
    IDSPSAGAKS LRQAYDCWMA KADPIEFARD NNEFARAFES FPGDADSLYP 450
    GWRDKLGVHK 460
    Length:460
    Mass (Da):50,289
    Last modified:June 12, 2007 - v1
    Checksum:iADFD0E4F9B87956D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009247 Genomic DNA. Translation: BAF61766.1.
    RefSeqiWP_011930036.1. NC_009465.1.
    YP_001219490.1. NC_009465.1.

    Genome annotation databases

    EnsemblBacteriaiBAF61766; BAF61766; COSY_0653.
    GeneIDi5171911.
    KEGGivok:COSY_0653.
    PATRICi32021163. VBICanVes128383_0655.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP009247 Genomic DNA. Translation: BAF61766.1 .
    RefSeqi WP_011930036.1. NC_009465.1.
    YP_001219490.1. NC_009465.1.

    3D structure databases

    ProteinModelPortali A5CWB0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 412965.COSY_0653.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAF61766 ; BAF61766 ; COSY_0653 .
    GeneIDi 5171911.
    KEGGi vok:COSY_0653.
    PATRICi 32021163. VBICanVes128383_0655.

    Phylogenomic databases

    eggNOGi COG1850.
    HOGENOMi HOG000230831.
    KOi K01601.
    OMAi LDYYLEC.
    OrthoDBi EOG66QKT8.

    Enzyme and pathway databases

    BioCyci CVES412965:GHZZ-652-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPi MF_01339. RuBisCO_L_type2.
    InterProi IPR020871. RuBisCO.
    IPR020878. RuBisCo_large_chain_AS.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Reduced genome of the thioautotrophic intracellular symbiont in a deep-sea clam, Calyptogena okutanii."
      Kuwahara H., Yoshida T., Takaki Y., Shimamura S., Nishi S., Harada M., Matsuyama K., Takishita K., Kawato M., Uematsu K., Fujiwara Y., Sato T., Kato C., Kitagawa M., Kato I., Maruyama T.
      Curr. Biol. 17:881-886(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HAImported.

    Entry informationi

    Entry nameiA5CWB0_VESOH
    AccessioniPrimary (citable) accession number: A5CWB0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 12, 2007
    Last sequence update: June 12, 2007
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3